Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4078 113 1e-19
seq5249 95.1 4e-14
>seq4078
Length=18759
Score = 113 bits (124), Expect = 1e-19
Identities = 193/280 (69%), Gaps = 0/280 (0%)
Strand=Plus/Minus
Query 302564 TCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTT 302623
|||| | |||||||| ||||| ||||| |||||||| || || || || || |
Sbjct 8886 TCATGACGTCTTCCAGTGCCTTGACCAAACGGCGCTGAATGTAGCCCGTCTCAGCGGTCT 8827
Query 302624 TTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCG 302683
| ||||| |||||||| ||||| |||||||| |||| || ||||| || | ||| |
Sbjct 8826 TGACAGCAGTATCAATCAGACCCTCACGACCAGCCATGGCGTGGAAAAAGAACTCCGTGG 8767
Query 302684 GTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGA 302743
| || || | | | ||| | | || || |||||||| ||||||| | ||
Sbjct 8766 GAGTCAGTCCGCGCAGGTAAGAGTTTTGGACAAAGCCACGCGCAGCGGGCGAGTAATCAT 8707
Query 302744 ACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803
|||||| |||||||||||||| | || || | ||| | || || ||||| || || |
Sbjct 8706 CCTTGGTGAAGTGTGGCAGGGTGCGGTACTTGAACCCGAACGGAATGCGCTTGCCTTCGA 8647
Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
| ||||||||| | | | |||| |||||||| ||
Sbjct 8646 CCGACTGCTGTCCGACCAAAGCCGTCATTTGCGAAATGTT 8607
>seq5249
Length=10599
Score = 95.1 bits (104), Expect = 4e-14
Identities = 352/547 (64%), Gaps = 15/547 (3%)
Strand=Plus/Minus
Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688
|||| || |||||||||||||||||||| || || ||||| || | ||||| ||||
Sbjct 8044 TGTACTCGACAATCTCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGT 7985
Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748
| || | ||| ||||| |||||||| || ||| | ||| | || ||||| |||| |
Sbjct 7984 TGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAG 7925
Query 155749 CGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCG 155808
| |||| ||| ||| || | |||| || || | |||||||
Sbjct 7924 CCTCCAAAATGGCGTACCACAGCTTCTGGGCGCGGATAGTCTCACGACCACGGCCTTCCC 7865
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || || ||||||| | | || || || ||||| ||| || || |||
Sbjct 7864 TCTCGTACCTCTCATACAGC-TCCTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGG 7806
Query 155868 CACTTATCGGGGCAAAACAGCGACCAA-----ATTTTATTACCGATTACACGCTCCATAA 155922
|| | ||||| | || | |||| |||| | || ||||||| ||| |
Sbjct 7805 GCCTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCT--CG---ACACGCTTCATGA 7751
Query 155923 ATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGT 155982
| | |||| |||| | || ||||| | ||| | ||| ||| || | ||||
Sbjct 7750 ACAGATCAGGAACCCACAGGGCGTAGAACAAGTCGCGTGCGCGGACCTCTTCCTTTCCGT 7691
Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042
| ||||| || || || | ||| | || | || |||||||| || || |
Sbjct 7690 GGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGG 7631
Query 156043 CAAAACTACCA---TTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGA 156099
||||| |||| | | ||||||||||| || || || ||||| || || ||| |||
Sbjct 7630 CAAAAGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCGGTGTTGTTGTAGA 7571
Query 156100 CACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159
||| ||||| ||||| | || ||||| ||||| ||||| || ||| | || ||||
Sbjct 7570 CACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAG 7511
Query 156160 ATGAGCG 156166
||| ||
Sbjct 7510 TTGAACG 7504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471709206153076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |