Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3589 100 2e-16 >seq3589 Length=6346 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || || || ||||| || ||||| | || |||| || Sbjct 3210 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAGGTGGAGTCTTCG 3151 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || |||||| || || || ||| | ||| ||| ||| Sbjct 3150 GATACGATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 3091 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| ||||| || ||||| ||||| | | || |||| ||||||||| Sbjct 3090 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGATGGCCGGACGTTGGCCGACTACAAC 3031 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 3030 ATCCAGAAGGAGTCCACTCTGCACTTGGTG 3001 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| ||||| || ||||| |||||||| | ||| ||| | Sbjct 3438 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATTACGCTTGAAGTCGAGTCGTCA 3379 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || ||||| || || || || | || |||||| Sbjct 3378 GACACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCGCCCGATCAG 3319 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| ||| || || ||||| ||||||| || ||| |||| ||||||||| Sbjct 3318 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGACGGCAGAACGTTGGCAGACTACAAC 3259 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || ||||||||||| || ||||| ||||| Sbjct 3258 ATCCAAAAGGAGTCAACCCTGCACTTGGTG 3229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398848857184372