Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq3589 100 2e-16
>seq3589
Length=6346
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || || || ||||| || ||||| | || |||| ||
Sbjct 3210 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAGGTGGAGTCTTCG 3151
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || |||||| || || || ||| | ||| ||| |||
Sbjct 3150 GATACGATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 3091
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || |||| ||||| || ||||| ||||| | | || |||| |||||||||
Sbjct 3090 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGATGGCCGGACGTTGGCCGACTACAAC 3031
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 3030 ATCCAGAAGGAGTCCACTCTGCACTTGGTG 3001
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| ||||| || ||||| |||||||| | ||| ||| |
Sbjct 3438 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATTACGCTTGAAGTCGAGTCGTCA 3379
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || || ||||| || || || || | || ||||||
Sbjct 3378 GACACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCGCCCGATCAG 3319
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || |||| ||| || || ||||| ||||||| || ||| |||| |||||||||
Sbjct 3318 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGACGGCAGAACGTTGGCAGACTACAAC 3259
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| ||||||||||| || ||||| |||||
Sbjct 3258 ATCCAAAAGGAGTCAACCCTGCACTTGGTG 3229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398848857184372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |