Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5249 275 6e-69 seq1666 168 6e-37 seq3589 129 6e-25 seq2177 113 4e-20 seq2758 98.7 1e-15 >seq5249 Length=10599 Score = 275 bits (304), Expect = 6e-69 Identities = 1004/1545 (65%), Gaps = 50/1545 (3%) Strand=Plus/Minus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || || || ||||| || |||||||| || ||| || | |||| || | || Sbjct 8653 TTGACAACTTGGAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGAGGTGTAGGGC 8594 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 ||||| |||||||| ||| | || || |||| || || |||||| || || Sbjct 8593 TCAAAACACTCGTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCATGGGAGCAACA 8534 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439 |||| |||||||| ||| | || | || ||| |||||| ||||||||||| Sbjct 8533 AGCAAGCTGTTGCGCACGCCGTGTAGAGCAATCTCGCCCTTGAGAGCCTCCCAGTCCCAG 8474 Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTG 148499 || | || ||| ||||||||||||||| |||| ||||| | || || Sbjct 8473 AGGTCTGTGGGCGTCTTGTTCCACATGTCGTATTGCAAGATGCCCTGAGAGGCCGGCGAA 8414 Query 148500 CCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC--TCGAGCG 148557 || |||||||| ||| | ||| | | | ||||| || | | | | || || | Sbjct 8413 CCTTCGTACGACGAGTAAGCTCCATCCTTCTTAGCCAGCTCA-ATCGAGGCAGTC-AGGG 8356 Query 148558 CGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTT---T 148614 | |||| ||| || |||||| ||| || |||| ||| || ||| ||| | Sbjct 8355 CACCGT-GTAGATGGTCTCGAAAATCTGAATGTTAAGCTGCCTGGCC---TCGGGAGAGT 8300 Query 148615 CGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGG 148674 || | | ||| || || | || || ||||||||||| | || || || |||| | Sbjct 8299 CGAAAGCCATGCGGAGGGCGAGGAAAGCATCGGCAAGGCCGTTGACACCGACAGCAATCG 8240 Query 148675 GCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGA-TAGTGGTTGCGGTCGATG 148733 | ||||| |||||| | || ||| || ||| ||||| ||| ||||||| Sbjct 8239 GGCGGTGGCGCATGTTGCTCTTCCTGGC-CTCGGGAACGGGGTAGTGATTGATGTCGATG 8181 Query 148734 ATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA- 148792 ||||||| || || || | |||| || | | ||||| | || | ||| Sbjct 8180 ATCTTGTTCAGGTTCTTGACAAGGACCTGGGTGACCTCGTGCAGCTTCTTGAAGTTGTAG 8121 Query 148793 --------CTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACG 148844 || | |||| || | | | || | ||| | ||||| | ||||| || Sbjct 8120 ACACCATTCTCGACATCGACAAAGG-TGGGA--AGGGCCAGGGAGGCCAAGTTGCAGACA 8064 Query 148845 GCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG---CTGCATTTG 148901 || ||| || ||||| ||||||| || ||||| |||||| ||| |||| || Sbjct 8063 GCAACCTCGTCGGGGGCAGTGTACTCGACAATCTCACAGCACAGGTTGGAGCTGCGAATG 8004 Query 148902 ATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTAC 148961 | |||| ||||||||| |||||||||| |||||| ||||||||||| |||||| | Sbjct 8003 GTA---CCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAG 7947 Query 148962 GGTCCGCCAGTTTCCACCTGCGTTTCCACTATGA---ACCGATGCAGGTCCTGCGCGCGC 149018 || ||| || || ||| | |||| ||| ||| ||| | ||| ||||| Sbjct 7946 GGGTTGCCGGTCTCGGTCTGAGCCTCCAAAATGGCGTACCA---CAGCTTCTGGGCGCGG 7890 Query 149019 ACTTGCTGCTCGTAG-CGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTC 149077 | || | || || || ||| |||||| ||||||| ||| ||| | || Sbjct 7889 ATAGTCT-CACGACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACTCGTC 7831 Query 149078 GCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTC 149137 ||||||| |||| ||||||| ||| || ||| ||||||||||| | ||| |||||| Sbjct 7830 GCCGTAGACATCGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGCCGTT 7771 Query 149138 CGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGC 149197 | || |||||||| |||||||| || ||||| || ||||| | | |||||| || Sbjct 7770 TTGCTCGACACGCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAACAAGTCGCGTGC 7711 Query 149198 CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTG 149257 | ||||| || ||| ||| |||| ||| | | ||| | ||| ||||| Sbjct 7710 GCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTG 7651 Query 149258 CCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTG 149314 ||| ||||| | ||| | || | || || |||| ||||| |||||||| |||| Sbjct 7650 CCAAGGCTCCAGGTAGATGGCAAAAGCACCAGGGCGCTTGTTGCCACCCTGGTCAACGTA 7591 Query 149315 GCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT 149374 ||| | ||||||| | || || | ||| || | ||| ||| |||||||| || Sbjct 7590 GCGAGCGGTGTTGTTGTAGACACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCGTTGGT 7531 Query 149375 A-GAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC-G 149432 | ||| |||| ||| | || | ||| ||||||| ||||| || || | Sbjct 7530 ACCAGC-AATGTAGGAGCCAGTTGAACGGATGCGGTGGACGTTGAGACCGATTCCACCGG 7472 Query 149433 CCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTC 149491 |||| ||| || || || | |||| ||| || ||||||||||||||||||||| Sbjct 7471 CCGT-CTTGGAAATCATGGCACAAGTC-TTGAGGGTGTCGTAGATGCCCTCGATGCTGTC 7414 Query 149492 GCGCTTCATGGTCAGCAGAAAGCACGA-GCACATTTGCGGAAAACGCGTGCCGGCCGCGA 149550 ||||||| | || ||||| || ||| | || || | || || || || Sbjct 7413 CTCCTTCATGTCGATCAAGAAGCATGATGCA-AGCTGGGGCTTGGGGGTACCAGCGTTGA 7355 Query 149551 ACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCA 149610 ||| |||||| ||||| ||||| || || || ||||| | ||||| || | Sbjct 7354 ACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAGACATCAAGTTGTACGTTTCAATGG 7295 Query 149611 CGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTC 149670 | || |||| ||||| ||||| || | ||||| ||||| | ||| ||||| |||| Sbjct 7294 CCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACACGCATAATCATGTGCTGTGGTC 7235 Query 149671 GCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAA 149730 || || || ||| | || ||||||||| | || || |||||| |||||| Sbjct 7234 TTTCGGCAACCTTGCCATCGATGCGGAGCAAGTATGACCTCTCGAGCGTCTTGAAGCCAA 7175 Query 149731 AGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775 |||| | ||||| ||||||||| ||| | | ||||| | || || Sbjct 7174 AGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTTGA 7130 >seq1666 Length=59928 Score = 168 bits (186), Expect = 6e-37 Identities = 341/502 (68%), Gaps = 13/502 (3%) Strand=Plus/Plus Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414 || || || ||||| ||||| || ||||| || ||||| | | ||||||||| | ||| Sbjct 55206 TAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAAATGTTCTCCATG 55265 Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474 || ||||| |||||| | | ||| ||| ||| | ||| | | || ||||| ||| Sbjct 55266 AAGTCGAAGGGGTTGGTAGAGTTGTAGTGCTTCTTGTTGCCAAGCGCCACCAGCAGGCGG 55325 Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACC 120534 || || |||||||||||||||| ||||||| ||||||||||| |||| || || Sbjct 55326 TCAGCAACAAACTCAATGTACTGGCACATGAGGCCAGCGTTCATGCCGAGCAGAGCAACG 55385 Query 120535 GGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCT---CCTTGAACATGGC- 120590 || | || || | ||||| | |||||| || || |||| | ||| | | | Sbjct 55386 GGGAGAGCGTCAGTCAGGAACTCTTGCTCAATCTCGACGGCCTCGACAATGATCTTCTCA 55445 Query 120591 -GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAA 120649 ||| | | | || ||| ||| | |||| | | | || |||||| |||| Sbjct 55446 ACAGCCTCG-GGGGTCGG----CTTCGACTTGATGTGAG---AGAAGAGCAGGCAGGCAA 55497 Query 120650 AGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCA 120709 |||| ||||||| |||||||||||| || || ||||||||| || ||||| || |||| Sbjct 55498 AGTCGGTGTGCATGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAATGTCAGACCAGGCA 55557 Query 120710 TGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCT 120769 | | || | |||||| |||| |||| || ||| ||| ||||| | |||| Sbjct 55558 TCAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCGCTGAAGAAGATACCCT 55617 Query 120770 CCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACT 120829 | ||| |||||||||| | ||| || || |||| ||||| | |||||| Sbjct 55618 CGACGGCAGCAAAGGCGATGAGACGCGATGCAAAGGTCGAGTTCTTGTCGCAGATCCAGC 55677 Query 120830 TCATGGCCCACTCGGCCTTTTT 120851 || ||||| |||||||| || Sbjct 55678 GCAGAGCCCAGTCGGCCTTCTT 55699 >seq3589 Length=6346 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||| || || || ||||| || ||| ||| |||||||||| Sbjct 3233 AAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCCAACGTTCTGCCGTCCTCGAGC 3292 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || |||| || |||||||| ||||| ||||| || |||||||| |||| Sbjct 3293 TGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGGGATACCCTCCTTGTCTTGGATC 3352 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| |||||| | | ||| || || | || | ||| |||||| Sbjct 3353 TTCGACTTGACGTTGTCAATCGTGTCTGACGACTCGACTTCAAGCGTAATGGTCTTGCCG 3412 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || ||||| |||||||| Sbjct 3413 GTCAAAGTCTTGACGAAGATCTGCAT 3438 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| ||| ||| | | | ||||| ||||||||||| Sbjct 3014 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAACGTCCGGCCA-TCCTCAAGCTGCTTGCC 3072 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| |||| || ||||||||||| || || ||||| |||||||| ||||| ||| Sbjct 3073 CGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTT 3132 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||| || | | |||||| || | || | || |||||||||| || Sbjct 3133 GACGTTGTCGATCGTATCCGAAGACTCCACCTCAAGCGTAATCGTCTTGCCGGTCAAGGT 3192 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 3193 CTTGACGAAGATCTGCAT 3210 Score = 105 bits (116), Expect = 6e-18 Identities = 130/174 (75%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| | | | ||||| ||||||||||| Sbjct 3749 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 3807 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||| ||| || |||||||| |||||||| |||||| ||| Sbjct 3808 AGCGAAGATGAGACGCTGCT-GTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 3866 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | ||||||| || ||| || || | ||||| ||| ||||| || Sbjct 3867 GACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 3920 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| || ||||| || ||||| ||| | | ||| ||| ||||||||| Sbjct 3461 AAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGACC-GTCCTCGAG 3519 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| ||| | || | ||||||||||| || |||||||| ||||| || || Sbjct 3520 TTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTATCCTGAAT 3579 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||||| | || || |||| ||||| ||| ||||| Sbjct 3580 CTTGGACTTGACATTGTCGATGGTGTCGGACGATTCGACTTCGAGGGTGATGGTCTTGCC 3639 Query 133634 GGT 133636 || Sbjct 3640 AGT 3642 >seq2177 Length=34801 Score = 113 bits (124), Expect = 4e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || || ||||||||||| || || ||||| ||||| Sbjct 6170 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 6111 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||| | || ||| || |||| ||||| Sbjct 6110 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGAT 6051 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAA 133651 ||| ||||| ||||| || || ||||| Sbjct 6050 GGTCTTGCCCGTCAGGGTCTTGACGAA 6024 >seq2758 Length=2532 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| ||| || |||| |||||||||||||||||| Sbjct 1659 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 1600 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 ||| | || || |||||||||||||| |||||||| |||||||| || Sbjct 1599 GCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCTGT 1553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483386066215520