Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3589 84.2 1e-11
>seq3589
Length=6346
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||| || || || ||| ||||| |||||||| || |
Sbjct 3211 ACCACCACGGAGACGAAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGC 3270
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| || | || || || |||||||||| ||||||||||| ||||
Sbjct 3271 CAACGTTCTGCCGTCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGG 3330
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || ||| | | || | ||| | ||||| || || |
Sbjct 3331 GATACCCTCCTTGTCTTGGATCTTC-GACTTGACGTTGTCAATCGTGTCTGACGACTCGA 3389
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| ||| || || || || || || || || || ||||||||||||
Sbjct 3390 CTTCAAGCGTAATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCATA 3439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328680973052160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |