Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5249 102 2e-16 >seq5249 Length=10599 Score = 102 bits (112), Expect = 2e-16 Identities = 193/280 (69%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 173079 GTGCTTTTGGTTATTTTTGCGGCATATGGCGTCCTTGTAGACGATGAAGGGCATACCAAC 173138 || ||||||||| | |||||| ||||||||||||| |||||||| | || Sbjct 7995 GTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGT 7936 Query 173139 CTCCGCTTGAGCCACCAAAATGTGGTGCCAAAGTTCTTGGGCTTTTACGG-TAGT-TCTC 173196 ||| | |||||| |||||||| || ||| || | ||||| ||| |||| || | Sbjct 7935 CTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTCTGGGCG----CGGATAGTCTCAC 7880 Query 173197 G--CTCTTCCTTCTTTTTCGTATCTCTCATAGAGGTCTTCGAAATCCTTCCCGTAAATTT 173254 | | | ||||| | ||||| |||||||| || || || || || | ||||| | | Sbjct 7879 GACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACTCGTCGCCGTAGACAT 7820 Query 173255 CGTCAAGACCGGGAGCTTCCTTCGGACAAAAGAGACTCCAATTTCCATCGGTCTCGACCC 173314 || | ||||| || || || | || || | |||| |||||| || | |||||| | Sbjct 7819 CGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACAC 7760 Query 173315 TCTTCATGAAGAGGTCGGAAGTCCAAATCGCGTAGAACAA 173354 ||||||||| || || | | ||| | ||||||||||| Sbjct 7759 GCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAACAA 7720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181733763329908