Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 102 2e-16
>seq5249
Length=10599
Score = 102 bits (112), Expect = 2e-16
Identities = 193/280 (69%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 173079 GTGCTTTTGGTTATTTTTGCGGCATATGGCGTCCTTGTAGACGATGAAGGGCATACCAAC 173138
|| ||||||||| | |||||| ||||||||||||| |||||||| | ||
Sbjct 7995 GTTCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGT 7936
Query 173139 CTCCGCTTGAGCCACCAAAATGTGGTGCCAAAGTTCTTGGGCTTTTACGG-TAGT-TCTC 173196
||| | |||||| |||||||| || ||| || | ||||| ||| |||| || |
Sbjct 7935 CTCGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTCTGGGCG----CGGATAGTCTCAC 7880
Query 173197 G--CTCTTCCTTCTTTTTCGTATCTCTCATAGAGGTCTTCGAAATCCTTCCCGTAAATTT 173254
| | | ||||| | ||||| |||||||| || || || || || | ||||| | |
Sbjct 7879 GACCACGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACTCGTCGCCGTAGACAT 7820
Query 173255 CGTCAAGACCGGGAGCTTCCTTCGGACAAAAGAGACTCCAATTTCCATCGGTCTCGACCC 173314
|| | ||||| || || || | || || | |||| |||||| || | |||||| |
Sbjct 7819 CGGCGAGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACAC 7760
Query 173315 TCTTCATGAAGAGGTCGGAAGTCCAAATCGCGTAGAACAA 173354
||||||||| || || | | ||| | |||||||||||
Sbjct 7759 GCTTCATGAACAGATCAGGAACCCACAGGGCGTAGAACAA 7720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181733763329908
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |