Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq5249 82.4 7e-11 >seq5249 Length=10599 Score = 82.4 bits (90), Expect = 7e-11 Identities = 181/266 (68%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 138142 ACGTTGAGGCCGATGCCGCCT-CCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTCT 138200 |||||||| ||||| || || |||| || || |||||||||||| ||||| || Sbjct 7493 ACGTTGAGACCGATTCCACCGGCCGTCTTG-GAAATCATGGCACAAGTCTTGAGGGTGTC 7435 Query 138201 ATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAACACGACGACATTTGAGG 138260 |||||||| | |||||||| |||| |||| || | | || || | | || || Sbjct 7434 GTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGATGCAAGCTGGGG 7375 Query 138261 CATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAAA-CATTTTCGAGCGCA 138319 | | | ||||| ||| | |||||| |||||||||||| | ||| ||| || Sbjct 7374 CTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTACTTTTGAG-ACA 7316 Query 138320 TCAATCTATATGACTCGATCGCACTCTCGATATCATCACCATGAATCTGAAGAGCGACAC 138379 |||| | || | || || || | || || | || || || || || |||||||| Sbjct 7315 TCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCAACAGCGACAC 7256 Query 138380 GCATCAGCATGTGTTGAGGTCTCTCG 138405 |||| | |||||| || ||||| ||| Sbjct 7255 GCATAATCATGTGCTGTGGTCTTTCG 7230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445062419967360