Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq382 123 3e-23
>seq382
Length=29631
Score = 123 bits (136), Expect = 3e-23
Identities = 121/156 (78%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985
|| || |||| |||||||||||||||||| |||| ||||||| | || |||
Sbjct 28563 TCGACATGGTCGAGGTAGACGTGCGCGTCGCCCATGGTGTGCGTCAGCGAGCCGGGCACC 28504
Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045
||| || ||||| |||| ||||| ||||||||| | ||||||||| |||||||||||
Sbjct 28503 AGGTCGCAGACGTGTGCCAGCATGTGGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 28444
Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGC 147081
|| || ||||||||||| | || | ||||||||||
Sbjct 28443 ACGCCGAGGCCCATGTCGCAGGAGCGCTGGTACAGC 28408
Score = 100 bits (110), Expect = 3e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290
||||||||| |||||||| ||| ||||| | |||||| ||||| ||| |||||
Sbjct 28198 CAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGCGTGGCAGTCGACGTAGTCGGCGCCAAA 28139
Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350
||||| ||||||||| |||||||| || ||||||||||| || | ||| | ||
Sbjct 28138 GTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCGGTGGCCCAGTCC 28079
Query 147351 CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410
| | | | || ||| | | ||||||| | |||||||||| | ||| | | |
Sbjct 28078 CACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGATCCCCGCGTCTGT 28019
Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455
||| ||| || || |||| ||||||||||||||||||
Sbjct 28018 CAGCGGCTTGGATGATGTCCTGCCCGAGATGAACCAGAGCAGCTC 27974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583446076387200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |