Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3589 165 8e-36 seq5249 163 3e-35 seq2758 93.3 4e-14 seq2177 93.3 4e-14 >seq3589 Length=6346 Score = 165 bits (182), Expect = 8e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | ||| | ||| || || || |||||||| ||||||||||| ||| Sbjct 3212 CCACCACGGAGACGAAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCC 3271 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 |||| | || ||| |||||||| |||||||||||||||| ||||||||||||||||| Sbjct 3272 AACGTTCTGCC-GTCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGG 3330 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || ||||| || || ||||| ||| | ||||| ||||| || || Sbjct 3331 GATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTGTCTGACGACTCGAC 3390 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| || ||||| ||||| || ||||| || ||||| Sbjct 3391 TTCAAGCGTAATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 3438 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || ||||||||||| ||||||||||||||| || Sbjct 3440 CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGCA 3499 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || ||| ||||| || ||||| || || ||||| |||||||| || ||||| Sbjct 3500 AGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 3559 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | |||||||||||||| || Sbjct 3560 ATGCCCTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGACGATTCGACT 3619 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 3620 TCGAGGGTGATGGTCTTGCCAGT 3642 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | ||| | ||| || ||||| ||||| || ||||||||||| ||| Sbjct 2984 CCACCGCGGAGACGGAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3043 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 ||| || | || || ||||| ||||| || ||||||| |||||||| || || || Sbjct 3044 AAC-GTCCGGCCATCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGG 3102 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || ||||| || ||||| ||| | || || || || ||||| Sbjct 3103 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATCGTATCCGAAGACTCCAC 3162 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || ||||| || || || ||||| || ||||| Sbjct 3163 CTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3210 Score = 100 bits (110), Expect = 3e-16 Identities = 134/185 (72%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| ||||| || ||||| || |||||||||||| | | |||| | || || Sbjct 3737 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCA 3796 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || || | ||||||||| || || || ||||| || || || || Sbjct 3797 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTG-TCAGGGGGGATGCCCTCCTTGTCCTGG 3855 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || || || || || || ||||| || Sbjct 3856 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 3915 Query 134685 CCGGT 134689 || || Sbjct 3916 CCAGT 3920 >seq5249 Length=10599 Score = 163 bits (180), Expect = 3e-35 Identities = 545/837 (65%), Gaps = 11/837 (1%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | |||| || || || || || |||||||| ||||||| ||| | Sbjct 7240 CAGCACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAGAACATTGAAAAGGCCATT 7299 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 ||||||||| | |||||||| || | ||||| |||||||| |||||| |||| | Sbjct 7300 GAAACGTACAACTTGATGTCTCAAAAGTACTTTACCCACGCTTCTCCCACCTTGTTCAAC 7359 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || || || | ||| || | | || || || ||| | |||| || |||||| Sbjct 7360 GCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAGGAGGACAGC 7419 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGG-CGGCG 7801 ||||| ||||| ||| |||| || | || ||| |||| |||||| || |||| ||| | Sbjct 7420 ATCGAGGGCATCTACGACACCCT-CAAGACTTGTGCCATGATTTCC-AAGACGGCCGGTG 7477 Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACG 7861 |||| ||||| ||||| || | | || | | || | ||| | ||||||| Sbjct 7478 GAATCGGTCTCAACGTCCACCGCATCCGTTCAACTGGCTCCTACATTGCTGGTACCAACG 7537 Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921 | | ||| ||| | |||||| | || || | ||| ||| | | || | || | Sbjct 7538 GCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTTG 7597 Query 7922 ACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978 ||||||| || |||||| || || ||||||||| ||||||| |||||||| | Sbjct 7598 ACCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCCG 7657 Query 7979 ACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCG 8038 || | | | | | || | || || ||| || ||||| | || |||| Sbjct 7658 ACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGCGCACGCG 7717 Query 8039 ATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCAC 8098 | | |||| || ||||||| || |||||||| |||| ||| || | ||| Sbjct 7718 ACTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAGCAAAACGGCG 7777 Query 8099 AATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTAT-TAAAAAACGTTTACGGTTCAAAA 8157 | ||| | ||||||||||| | || |||| | | | || ||||| | Sbjct 7778 ATTGGACTCTCATGTGCCCTCA-CGAGGCCCCGGGTCTCGCCGATGTCTACGGCGACGAG 7836 Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAAGC 8216 ||||| | |||| | ||||| || || || | |||| | | | | || Sbjct 7837 TTTGAGGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTCGTGAGACTA-TCCGCGC 7895 Query 8217 GCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCT 8276 | | ||| ||||||| | || ||| | ||| ||||| | || | |||||| Sbjct 7896 CCAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCCCTTCATGCT 7955 Query 8277 GTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAG 8336 ||||| |||||||||||| ||| ||||| |||| ||| |||| |||||| | || Sbjct 7956 CTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTGGGTACCATTCGCAGCTC 8015 Query 8337 CAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAA 8393 ||| |||||| ||| ||||| |||||| || |||||||| || || || ||||| Sbjct 8016 CAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGTCTGCAA 8072 >seq2758 Length=2532 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || |||||||||||| | ||| | Sbjct 1680 AGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 1621 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || |||| |||||||| ||||| || ||||| || Sbjct 1620 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 1561 Query 134616 TTTTCT 134621 || ||| Sbjct 1560 TTGTCT 1555 >seq2177 Length=34801 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| | ||| |||||||| ||||| || || | Sbjct 6204 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 6145 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 6144 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 6085 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || ||||| || ||||| || || || | || || |||| Sbjct 6084 CGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 6025 Query 134704 A 134704 | Sbjct 6024 A 6024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505362087124960