Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3589 165 8e-36
seq5249 163 3e-35
seq2758 93.3 4e-14
seq2177 93.3 4e-14
>seq3589
Length=6346
Score = 165 bits (182), Expect = 8e-36
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | ||| | ||| || || || |||||||| ||||||||||| |||
Sbjct 3212 CCACCACGGAGACGAAGCACCAAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCC 3271
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|||| | || ||| |||||||| |||||||||||||||| |||||||||||||||||
Sbjct 3272 AACGTTCTGCC-GTCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGG 3330
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| || || ||||| ||| | ||||| ||||| || ||
Sbjct 3331 GATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTGTCTGACGACTCGAC 3390
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| || ||||| ||||| || ||||| || |||||
Sbjct 3391 TTCAAGCGTAATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 3438
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct 3440 CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGCA 3499
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || ||| ||||| || ||||| || || ||||| |||||||| || |||||
Sbjct 3500 AGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 3559
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | |||||||||||||| ||
Sbjct 3560 ATGCCCTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGACGATTCGACT 3619
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || ||||| || || ||
Sbjct 3620 TCGAGGGTGATGGTCTTGCCAGT 3642
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | ||| | ||| || ||||| ||||| || ||||||||||| |||
Sbjct 2984 CCACCGCGGAGACGGAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3043
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
||| || | || || ||||| ||||| || ||||||| |||||||| || || ||
Sbjct 3044 AAC-GTCCGGCCATCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGG 3102
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||| || || || ||||| || ||||| ||| | || || || || |||||
Sbjct 3103 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATCGTATCCGAAGACTCCAC 3162
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || || ||||| || || || ||||| || |||||
Sbjct 3163 CTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3210
Score = 100 bits (110), Expect = 3e-16
Identities = 134/185 (72%), Gaps = 1/185 (1%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| ||||| || ||||| || |||||||||||| | | |||| | || ||
Sbjct 3737 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCA 3796
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || || | ||||||||| || || || ||||| || || || ||
Sbjct 3797 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTG-TCAGGGGGGATGCCCTCCTTGTCCTGG 3855
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||||| || || || || || || ||||| ||
Sbjct 3856 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 3915
Query 134685 CCGGT 134689
|| ||
Sbjct 3916 CCAGT 3920
>seq5249
Length=10599
Score = 163 bits (180), Expect = 3e-35
Identities = 545/837 (65%), Gaps = 11/837 (1%)
Strand=Plus/Plus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|| |||||| | |||| || || || || || |||||||| ||||||| ||| |
Sbjct 7240 CAGCACATGATTATGCGTGTCGCTGTTGGAATCCACGGCGAGAACATTGAAAAGGCCATT 7299
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
||||||||| | |||||||| || | ||||| |||||||| |||||| |||| |
Sbjct 7300 GAAACGTACAACTTGATGTCTCAAAAGTACTTTACCCACGCTTCTCCCACCTTGTTCAAC 7359
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
|| || || | ||| || | | || || || ||| | |||| || ||||||
Sbjct 7360 GCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAGGAGGACAGC 7419
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGG-CGGCG 7801
||||| ||||| ||| |||| || | || ||| |||| |||||| || |||| ||| |
Sbjct 7420 ATCGAGGGCATCTACGACACCCT-CAAGACTTGTGCCATGATTTCC-AAGACGGCCGGTG 7477
Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACG 7861
|||| ||||| ||||| || | | || | | || | ||| | |||||||
Sbjct 7478 GAATCGGTCTCAACGTCCACCGCATCCGTTCAACTGGCTCCTACATTGCTGGTACCAACG 7537
Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921
| | ||| ||| | |||||| | || || | ||| ||| | | || | || |
Sbjct 7538 GCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTTG 7597
Query 7922 ACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978
||||||| || |||||| || || ||||||||| ||||||| |||||||| |
Sbjct 7598 ACCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCCG 7657
Query 7979 ACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCG 8038
|| | | | | | || | || || ||| || ||||| | || ||||
Sbjct 7658 ACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGCGCACGCG 7717
Query 8039 ATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCAC 8098
| | |||| || ||||||| || |||||||| |||| ||| || | |||
Sbjct 7718 ACTTGTTCTACGCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAGCAAAACGGCG 7777
Query 8099 AATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTAT-TAAAAAACGTTTACGGTTCAAAA 8157
| ||| | ||||||||||| | || |||| | | | || ||||| |
Sbjct 7778 ATTGGACTCTCATGTGCCCTCA-CGAGGCCCCGGGTCTCGCCGATGTCTACGGCGACGAG 7836
Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAAGC 8216
||||| | |||| | ||||| || || || | |||| | | | | ||
Sbjct 7837 TTTGAGGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTCGTGAGACTA-TCCGCGC 7895
Query 8217 GCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCT 8276
| | ||| ||||||| | || ||| | ||| ||||| | || | ||||||
Sbjct 7896 CCAGAAGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCCCTTCATGCT 7955
Query 8277 GTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAG 8336
||||| |||||||||||| ||| ||||| |||| ||| |||| |||||| | ||
Sbjct 7956 CTACAAGGACGCTTGCAACCGCAAGAGCAACCAAAAGAACCTGGGTACCATTCGCAGCTC 8015
Query 8337 CAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAA 8393
||| |||||| ||| ||||| |||||| || |||||||| || || || |||||
Sbjct 8016 CAACCTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGTCTGCAA 8072
>seq2758
Length=2532
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| ||||| ||||| || ||||| || |||||||||||| | ||| |
Sbjct 1680 AGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 1621
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || |||| |||||||| ||||| || ||||| ||
Sbjct 1620 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 1561
Query 134616 TTTTCT 134621
|| |||
Sbjct 1560 TTGTCT 1555
>seq2177
Length=34801
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | |||| | ||| |||||||| ||||| || || |
Sbjct 6204 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 6145
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| |||||||| || || || ||||| || || || || || || ||||| ||
Sbjct 6144 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 6085
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || ||||| || ||||| || || || | || || ||||
Sbjct 6084 CGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 6025
Query 134704 A 134704
|
Sbjct 6024 A 6024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505362087124960
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