Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5249 105 2e-17 seq1666 100 9e-16 >seq5249 Length=10599 Score = 105 bits (116), Expect = 2e-17 Identities = 356/543 (66%), Gaps = 16/543 (3%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||| | || || ||| ||||||| | ||||||| ||||||||||| || || || || Sbjct 7548 CGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTTGACCAGGGTGG 7607 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090 | ||| ||||| || || || |||||||||||||||| |||||||||||| | | Sbjct 7608 CAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCCGACGTCTTCCC 7667 Query 255091 GTTTTTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGAC---AT 255144 || | | |||| ||||| ||| | || ||| | ||| |||||| | Sbjct 7668 CTTCCT--CGACCTCCG-CAAGAACCACGGAAAGGAAGAGGTCCGCGCACGCGACTTGTT 7724 Query 255145 CTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTG 255204 |||| || |||| | | || |||||||| ||| || || || | | ||| || Sbjct 7725 CTACGCC-CTGTGGGTTCCT--GATCTGTTCATGAAGCGTGTCGAGCAAAACGGCGATTG 7781 Query 255205 GAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGA 255264 || |||||||| || || | || ||||| | ||| | || ||||||||||| Sbjct 7782 GACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTACGGCGACGAGTTTGA 7841 Query 255265 AAAACTGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGA 255323 | |||||| | ||||||| | | ||||| | |||| | | | | | ||| ||| Sbjct 7842 GGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTCGTGAGACTA-TCCGCGCCCAGA 7900 Query 255324 AGATCTGGAACACGATGGTGCGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCACA 255383 || | ||| || | || || ||| || ||||| | || ||| | | ||| Sbjct 7901 AGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCCCTTCATGCTCTACA 7960 Query 255384 AAGAC-CACATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAAC 255442 | ||| | || |||| | | |||||| ||| ||||| || ||| |||| ||| Sbjct 7961 AGGACGCTTGCAACCGCAAGAGC-AACCAAAAGAACCTGGGTACCATTCGCAGCTCCAAC 8019 Query 255443 CTGTGCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCG 255502 |||||| |||||| | |||| | | | ||||| || || ||||||||||| Sbjct 8020 CTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGTCTGCAACTTGGCC 8079 Query 255503 TCC 255505 ||| Sbjct 8080 TCC 8082 >seq1666 Length=59928 Score = 100 bits (110), Expect = 9e-16 Identities = 120/162 (74%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767 ||| || |||| ||||||| ||||| || | || || |||||| ||| || |||| Sbjct 55643 GCGTCTCATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTC-GCGTCCA 55585 Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827 |||||||| | || |||||||| || |||| |||||||| || ||||| || ||| Sbjct 55584 TCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAGCTCATCT 55525 Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 ||| |||||||| |||| |||||| ||||| || |||| Sbjct 55524 CTCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCT 55483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588219025009860