Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 105 2e-17
seq1666 100 9e-16
>seq5249
Length=10599
Score = 105 bits (116), Expect = 2e-17
Identities = 356/543 (66%), Gaps = 16/543 (3%)
Strand=Plus/Plus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
|||| | || || ||| ||||||| | ||||||| ||||||||||| || || || ||
Sbjct 7548 CGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTTGACCAGGGTGG 7607
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090
| ||| ||||| || || || |||||||||||||||| |||||||||||| | |
Sbjct 7608 CAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCCGACGTCTTCCC 7667
Query 255091 GTTTTTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGAC---AT 255144
|| | | |||| ||||| ||| | || ||| | ||| |||||| |
Sbjct 7668 CTTCCT--CGACCTCCG-CAAGAACCACGGAAAGGAAGAGGTCCGCGCACGCGACTTGTT 7724
Query 255145 CTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTG 255204
|||| || |||| | | || |||||||| ||| || || || | | ||| ||
Sbjct 7725 CTACGCC-CTGTGGGTTCCT--GATCTGTTCATGAAGCGTGTCGAGCAAAACGGCGATTG 7781
Query 255205 GAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGA 255264
|| |||||||| || || | || ||||| | ||| | || |||||||||||
Sbjct 7782 GACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTACGGCGACGAGTTTGA 7841
Query 255265 AAAACTGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGA 255323
| |||||| | ||||||| | | ||||| | |||| | | | | | ||| |||
Sbjct 7842 GGAGCTGTATGAGAGGTACGAGAGGGAAGGCCGTGGTCGTGAGACTA-TCCGCGCCCAGA 7900
Query 255324 AGATCTGGAACACGATGGTGCGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCACA 255383
|| | ||| || | || || ||| || ||||| | || ||| | | |||
Sbjct 7901 AGCTGTGGTACGCCATTTTGGAGGCTCAGACCGAGACCGGCAACCCCTTCATGCTCTACA 7960
Query 255384 AAGAC-CACATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAAC 255442
| ||| | || |||| | | |||||| ||| ||||| || ||| |||| |||
Sbjct 7961 AGGACGCTTGCAACCGCAAGAGC-AACCAAAAGAACCTGGGTACCATTCGCAGCTCCAAC 8019
Query 255443 CTGTGCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCG 255502
|||||| |||||| | |||| | | | ||||| || || |||||||||||
Sbjct 8020 CTGTGCTGTGAGATTGTCGAGTACACTGCCCCCGACGAGGTTGCTGTCTGCAACTTGGCC 8079
Query 255503 TCC 255505
|||
Sbjct 8080 TCC 8082
>seq1666
Length=59928
Score = 100 bits (110), Expect = 9e-16
Identities = 120/162 (74%), Gaps = 1/162 (1%)
Strand=Plus/Minus
Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767
||| || |||| ||||||| ||||| || | || || |||||| ||| || ||||
Sbjct 55643 GCGTCTCATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTC-GCGTCCA 55585
Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827
|||||||| | || |||||||| || |||| |||||||| || ||||| || |||
Sbjct 55584 TCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAGCTCATCT 55525
Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
||| |||||||| |||| |||||| ||||| || ||||
Sbjct 55524 CTCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCT 55483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588219025009860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |