Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 158 2e-33
>seq5249
Length=10599
Score = 158 bits (174), Expect = 2e-33
Identities = 609/947 (64%), Gaps = 11/947 (1%)
Strand=Plus/Minus
Query 111210 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269
|||| ||| |||| | | |||||||| | || ||||| ||||| ||||| ||| |
Sbjct 8113 TCTCGACATCGACAAAGGTGGGAAGGGCCAGGGAGGCCAAGTTGCAGACAGCAACCTCGT 8054
Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329
| | |||||||| | ||| || || | |||||| || ||| || |||| |
Sbjct 8053 CGGGGGCAGTGTACTCGACAATCTCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGT 7994
Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389
|||||||||| ||||| |||||| || ||||||||||||||| |||| | || ||||
Sbjct 7993 TCTTTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCT 7934
Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCC 111448
| ||||| | | | ||| || | ||| | | || | ||| | | | | | |
Sbjct 7933 CGGTCTGAGCCTCCAAAATGGCGTACCACAGCTTCTG-GGCGCGGATAGTCTCACGACCA 7875
Query 111449 CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAG 111508
|| || ||| ||||||| | || || | |||||||| || || | |||| |
Sbjct 7874 CGGCCTTCCCTCTCGTACCTCTCATACAGCTCCTCAAACTCGTCGCCGTAGACATCGGCG 7815
Query 111509 AGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTC 111568
||||| || |||| || || || | |||| ||| | || || ||| || ||||||
Sbjct 7814 AGACCCGGGGCCTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTC 7755
Query 111569 ATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTC 111627
||||| || || |||| |||||||| | || | || | | | | || ||||||| |
Sbjct 7754 ATGAACAGATCAGGAACCCACAGGGCGTAGAACAAGTCGCGTGCGCGGA-CCTCTTCCTT 7696
Query 111628 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 111687
|| ||||| || | || ||||| | || || |||||||| ||||| || ||
Sbjct 7695 TCCGTGGTTCTTGCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTA 7636
Query 111688 GACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGT 111743
|| || | || || | | | | ||| | || | || ||||| || ||| ||
Sbjct 7635 GATGGCAAAAGCACCAGGGCGCTTGTTG-CCACCCTGGTCAACGTAGCGAGCGGTGTTGT 7577
Query 111744 TAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAG 111803
| | || || ||||| ||||| | || | || || || || || ||| |
Sbjct 7576 TGTAGACACGGAGCATGGGAATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGG 7517
Query 111804 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 111863
| | | | | | |||| || | || || || || ||| ||| || ||
Sbjct 7516 AGCCAGTTGAACGGATGCGGTGGACGTTGAGACCGATTCCACCGGCCGTCTTGGAAATCA 7457
Query 111864 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 111923
||||| | | || || | ||||| || | ||| ||||||||| || |||| |
Sbjct 7456 TGGCACAAGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCA 7397
Query 111924 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 111983
|||||| | | ||| || | || |||||||| ||||| | ||| || | ||||
Sbjct 7396 AGAAGCATGATGCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGT 7337
Query 111984 GAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 112042
| | || ||| ||| |||||| || ||| || || | | | ||||||| ||
Sbjct 7336 GGGT-AAAGTACTTTTGAGACATCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCG 7278
Query 112043 CCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCA 112102
|||||||| || | ||||| ||||| | ||||| |||||| |||| | |||||
Sbjct 7277 CCGTGGATTCCAACAGCGACACGCATAATCATGTGCTGTGGTCTTTCGGCAACCTTGCCA 7218
Query 112103 TCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
|||| || | | || | |||| || || |||| ||||||||
Sbjct 7217 TCGATGCGGAGCAAGTATGACCTCTCGAGCGTCTTGAAGCCAAAGTA 7171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627986875900800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |