Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1666 141 1e-28
>seq1666
Length=59928
Score = 141 bits (156), Expect = 1e-28
Identities = 349/522 (67%), Gaps = 22/522 (4%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 94792
|||||| || || | ||||| || || |||||| || ||| | || |||| | |
Sbjct 55715 AGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTC 55656
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
| ||||||| ||| ||| |||| ||||| || ||||||||||||||| || |
Sbjct 55655 GA-CCTTTGCATCGCGTCTCATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCT 55597
Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911
||||| ||| | || | |||||||||||||| ||||| ||||| ||||| ||||||
Sbjct 55596 CCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCC 55538
Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACT--TTT 94967
|||||||| |||||||| |||||||| | ||| || ||||| | | || | |
Sbjct 55537 AACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCT 55478
Query 94968 CAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGT 95027
|| || | || || || || | ||| || || | || || || |||||
Sbjct 55477 CACATCAAGTCG----AAGCCGACCCCCGAGGCTGTTGAGAAGATCATTGTCGAGGCCGT 55422
Query 95028 TGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTC 95087
||||||||| ||| ||| | || || || || ||||| |||| ||||| |
Sbjct 55421 CGAGATTGAGCAAGAGTTCCTGACTGACGCTCTCCCCGTTGCTCTGCTCGGCATGAACGC 55362
Query 95088 TGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGT 95147
|| |||| | || ||||||| ||| |||| | || || | | | |
Sbjct 55361 TGGCCTCATGTGCCAGTACATTGAGTTTGTTGCTGACCGCCTGCTGGTGGCGCT-----T 55307
Query 95148 GCCTCCAA-----TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTC 95202
| | ||| | ||||| | || || || |||||||||||||||||| |||
Sbjct 55306 GGCAACAAGAAGCACTACAACTCTACCAACCCCTTCGACTTCATGGAGAACATTTCGCTC 55247
Query 95203 GACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTAT 95244
|||| ||||| ||||||||||| ||| | ||||| ||||||
Sbjct 55246 AACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTAT 55205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583218892711520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |