Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5249 237 2e-57 >seq5249 Length=10599 Score = 237 bits (262), Expect = 2e-57 Identities = 395/566 (70%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 ||| |||||| |||| ||| |||||||||||||| ||||| | || ||| ||||||| Sbjct 7299 TGAAACGTACAACTTGATGTCTCAAAAGTACTTTACCCACGCTTCTCCCACCTTGTTCAA 7358 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 ||||||||| | || ||| | | |||||| || | | |||||||| ||| Sbjct 7359 CGCTGGTACCCCCAAGCCCCAGCTTGCATCATGCTTCTTGATCGACATGAAGGAGGACAG 7418 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 ||||| ||||||||||| || |||||| |||||| || |||||| | | ||||| Sbjct 7419 CATCGAGGGCATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGACGGCCGGTGG 7478 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 |||||| || || || | || ||||| | | ||| | || || || ||| Sbjct 7479 AATCGGTCTCAACG--TCCACCGCATCCGTTCAACTGGCTCCTACATTGCTGGTACCAAC 7536 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 ||| | || | || | | || |||||||| |||| ||||||||| || || ||||| Sbjct 7537 GGCACCTCCAACGGCCTGATTCCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTT 7596 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 |||||||||| |||||| || | || ||||||||||| ||||| ||||||||| Sbjct 7597 GACCAGGGTGGCAACAAGCGCCCTGGTGCTTTTGCCATCTACCTGGAGCCTTGGCACGCC 7656 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 ||| | | || ||||| || || ||| || || | |||||| | ||| || Sbjct 7657 GACGTCTTCCCCTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGCGCACGC 7716 Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718 ||| |||| ||| || |||||| |||| || || |||||| | || ||| | ||| Sbjct 7717 GACTTGTTCTAC-GCCCTGTGGGTTCCTGATCTGTTCATGAAGCGTGTCGAGCAAAACGG 7775 Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778 || ||| || |||||||| ||||| ||| || ||| | ||||||||| || || Sbjct 7776 CGATTGGACTCTCATGTGCCCTCACGAGGCCCCGGGTCTCGCCGATGTCTACGGCGACGA 7835 Query 53779 GTTTAACGAGATGTATCGGACGTACG 53804 |||| | ||| ||||| || ||||| Sbjct 7836 GTTTGAGGAGCTGTATGAGAGGTACG 7861 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| | ||| ||| |||||||||||| | ||| | | | | ||| || Sbjct 8767 TCAAGGCCCTCTACAAGACTGTGTGGGAGATTTCTCAGCGCAACATCGTCCAGATGGCTG 8826 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || |||||||| | ||||||||||| || || || |||||| |||| || | ||| Sbjct 8827 CCGACCGTGGTGCCTTTATCGACCAGTCTCAATCGCTCAACATCCACATGAAGGAGCCTA 8886 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | ||| |||| | | || ||||||||| || |||||| || || |||||||| | Sbjct 8887 CGATGGGCAAGATCACTTCCATGCACTTTGCTGGCTGGAAGCTTGGTCTGAAGACGGGCA 8946 Query 55908 TGTACTATCTGCGGAC 55923 ||||||| ||||| || Sbjct 8947 TGTACTACCTGCGCAC 8962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547176682530400