Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq382 134 1e-26 >seq382 Length=29631 Score = 134 bits (148), Expect = 1e-26 Identities = 214/301 (71%), Gaps = 6/301 (2%) Strand=Plus/Plus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTC 34378 |||| | ||||||||||||| ||||||| || | || ||||||| ||| ||| | Sbjct 28027 GGGGATCAAGATCTGGGACGGCAACGGGTCGCGGGCGTTCCTGGACA-GCGTGGGACTGG 28085 Query 34379 CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 | | || |||||||||||| ||||||| || ||||||||||||||| | |||||||| Sbjct 28086 GCCAC-CGCGAGGAGGGCGACCTGGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTTGGC 28144 Query 34439 GCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTAC 34498 || || || | || | || ||||| |||||||||| | ||||||||| || Sbjct 28145 GCCGACTACGTCGACTGCCACGCCGACTACACGGGACAGGGCGTCGACCAGCTGGCCGAC 28204 Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558 || ||||||| || | || || ||| | | ||| | ||| ||||||||||| Sbjct 28205 GTCATCGACAAGCTGCGCCACAAGCCCTTCGACCGGCGCATCATCATGAGCGCGTGGAAC 28264 Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617 ||| || ||| |||||| || || |||||||||| | ||| || |||||||| Sbjct 28265 CCGGCCGACCTCAAGAAGATGGCCCTGCCGCCGTGCCACA-TGTTTGCGCAGTTCTACGT 28323 Query 34618 C 34618 | Sbjct 28324 C 28324 Score = 134 bits (148), Expect = 1e-26 Identities = 214/301 (71%), Gaps = 6/301 (2%) Strand=Plus/Minus Query 6727 GACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCG 6785 ||||||||| || ||| | |||||||||| || || |||||| ||| || || Sbjct 28324 GACGTAGAACTGCGCAAACA-TGTGGCACGGCGGCAGGGCCATCTTCTTGAGGTCGGCCG 28266 Query 6786 GGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCA 6845 |||||||||||| ||| | ||| | | ||| || || | || ||||||| | Sbjct 28265 GGTTCCACGCGCTCATGATGATGCGCCGGTCGAAGGGCTTGTGGCGCAGCTTGTCGATGA 28206 Query 6846 CGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCG 6905 ||| ||||||||| | |||||||||| ||||| || | || | || || | Sbjct 28205 CGTCGGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGCGTGGCAGTCGACGTAGTCGG 28146 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965 | |||||||| | ||||||||||||||| || ||||||| |||||||||||| || | | Sbjct 28145 CGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCG-GTGG 28087 Query 6966 GGAA--CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 | ||| ||| ||||||| || | || ||||||| ||||||||||||| | ||| Sbjct 28086 CCCAGTCCCACGC-TGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGATCCC 28028 Query 7024 C 7024 | Sbjct 28027 C 28027 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34642 GCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGC 34701 ||| || || || || | |||||||| | || ||||| ||||||||||| || ||||| Sbjct 28408 GCTGTACCAGCGCTCCTGCGACATGGGCCTCGGCGTGCCCTTCAACATTGCCAGCTACGC 28467 Query 34702 TCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATAC 34761 |||||||| ||||| | || || ||| | |||| || || |||| ||| || Sbjct 28468 CCTGCTCACCCACATGCTGGCACACGTCTGCGACCTGGTGCCCGGCTCGCTGACGCACAC 28527 Query 34762 GTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACG 34821 |||| || ||||| ||||||| |||| |||| ||| | | ||||| | || Sbjct 28528 CATGGGCGACGCGCACGTCTACCTCGACCATGTCGACGCGCTTCAGCAGCAGCTCGAGCG 28587 Query 34822 AGAGCCCCGACCGTTCCCCCAGCTC 34846 |||||||| ||||| | |||| Sbjct 28588 CGAGCCCCGCGACTTCCCGCTGCTC 28612 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 |||| | ||||| |||||||| || | ||||| | | ||| |||| |||| Sbjct 28612 GAGCAGCGGGAAGTCGCGGGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTC 28553 Query 6559 CAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGAC 6618 ||||||| ||||| || |||| || ||| |||| || || |||| | ||| Sbjct 28552 GAGGTAGACGTGCGCGTCGCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGAC 28493 Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678 || || | ||||| |||||||| ||||| || ||||||||||| ||||| || | || Sbjct 28492 GTGTGCCAGCATGTGGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCC 28433 Query 6679 CATGTCTCCCGATCGTTGATAGAGC 6703 |||||| | || || || || ||| Sbjct 28432 CATGTCGCAGGAGCGCTGGTACAGC 28408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448230192346560