Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq382 113 4e-20
>seq382
Length=29631
Score = 113 bits (124), Expect = 4e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 29623 GGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATC 29682
|||||| | ||||||||| | |||| || || ||||| ||||||||||| || ||
Sbjct 28594 GGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTCGAGGTAGACGTGCGCGTC 28535
Query 29683 TCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742
|||| |||||| | | || || | || || |||||| |||| ||||| ||
Sbjct 28534 GCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGACGTGTGCCAGCATGTGGGT 28475
Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802
||| || | ||||||||| ||||| |||||||| ||||| |||||||| | || | |||
Sbjct 28474 GAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGAGCGCTG 28415
Query 29803 GTAGAGC 29809
||| |||
Sbjct 28414 GTACAGC 28408
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||| |||||||||||||||||| || |||||||| ||||| || | ||| | |
Sbjct 28140 AAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCGGTGGCCCAGT 28081
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| |||||| || | | || |||||| ||||||||||||| | |||| ||
Sbjct 28080 CCCACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGATCCCCGCGTCT 28021
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196
| ||| ||||| ||| || || |||||| |||||||| | | ||||||
Sbjct 28020 GTCAGCGGCTTGGATGATGTCCTGCCCGAGATGAACCAGAGCAGCTCGGCGATGACGGCG 27961
Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
| ||||| | |||||| |||||||| ||
Sbjct 27960 CGCAGGAAGACGCGCTTGGTTGTGAGGAGTGG 27929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406134746744728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |