Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq382 113 4e-20 >seq382 Length=29631 Score = 113 bits (124), Expect = 4e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 29623 GGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATC 29682 |||||| | ||||||||| | |||| || || ||||| ||||||||||| || || Sbjct 28594 GGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTCGAGGTAGACGTGCGCGTC 28535 Query 29683 TCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742 |||| |||||| | | || || | || || |||||| |||| ||||| || Sbjct 28534 GCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGACGTGTGCCAGCATGTGGGT 28475 Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802 ||| || | ||||||||| ||||| |||||||| ||||| |||||||| | || | ||| Sbjct 28474 GAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGAGCGCTG 28415 Query 29803 GTAGAGC 29809 ||| ||| Sbjct 28414 GTACAGC 28408 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| |||||||||||||||||| || |||||||| ||||| || | ||| | | Sbjct 28140 AAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCGGTGGCCCAGT 28081 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| |||||| || | | || |||||| ||||||||||||| | |||| || Sbjct 28080 CCCACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGATCCCCGCGTCT 28021 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 | ||| ||||| ||| || || |||||| |||||||| | | |||||| Sbjct 28020 GTCAGCGGCTTGGATGATGTCCTGCCCGAGATGAACCAGAGCAGCTCGGCGATGACGGCG 27961 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | ||||| | |||||| |||||||| || Sbjct 27960 CGCAGGAAGACGCGCTTGGTTGTGAGGAGTGG 27929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406134746744728