Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq382 114 1e-20 >seq382 Length=29631 Score = 114 bits (126), Expect = 1e-20 Identities = 228/338 (67%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444 |||||||| |||| || ||||||||||| ||| || |||| | | ||| | | Sbjct 28266 GGGTTCCACGCGCTCATGATGATGCGCCGGTCGAAGGGCTTGTGGCGCAGCTTGTCGATG 28207 Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504 ||| |||||| || || ||| |||| |||||| | ||| ||| || Sbjct 28206 ACGTCGGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGCGTGGCAGTCGACGTAGTCG 28147 Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 || || || |||| ||| |||||||||||||| || |||||||| ||||| || | ||| Sbjct 28146 GCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCGGTGG 28087 Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624 | | ||| |||||| || | | || |||||| ||||||||||||| | |||| Sbjct 28086 CCCAGTCCCACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGATCCCC 28027 Query 27625 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 27684 || | ||| ||||| ||| || || |||||| |||||||| | | | Sbjct 28026 GCGTCTGTCAGCGGCTTGGATGATGTCCTGCCCGAGATGAACCAGAGCAGCTCGGCGATG 27967 Query 27685 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||| | ||||| | |||||| |||||||| || Sbjct 27966 ACGGCGCGCAGGAAGACGCGCTTGGTTGTGAGGAGTGG 27929 Score = 113 bits (124), Expect = 3e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 27117 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTC 27176 |||||| | ||||||||| || |||| || || || || ||||||||||| ||||| Sbjct 28594 GGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTCGAGGTAGACGTGCGCGTC 28535 Query 27177 TCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236 |||| |||||| | | || || | || || |||||| |||| ||||| || Sbjct 28534 GCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGACGTGTGCCAGCATGTGGGT 28475 Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296 ||| || | ||||||||| ||||| ||||| || ||||| |||||||| | || | ||| Sbjct 28474 GAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGAGCGCTG 28415 Query 27297 GTAGAGC 27303 ||| ||| Sbjct 28414 GTACAGC 28408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369481314634988