Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq382 114 1e-20
>seq382
Length=29631
Score = 114 bits (126), Expect = 1e-20
Identities = 228/338 (67%), Gaps = 0/338 (0%)
Strand=Plus/Minus
Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444
|||||||| |||| || ||||||||||| ||| || |||| | | ||| | |
Sbjct 28266 GGGTTCCACGCGCTCATGATGATGCGCCGGTCGAAGGGCTTGTGGCGCAGCTTGTCGATG 28207
Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504
||| |||||| || || ||| |||| |||||| | ||| ||| ||
Sbjct 28206 ACGTCGGCCAGCTGGTCGACGCCCTGTCCCGTGTAGTCGGCGTGGCAGTCGACGTAGTCG 28147
Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564
|| || || |||| ||| |||||||||||||| || |||||||| ||||| || | |||
Sbjct 28146 GCGCCAAAGTGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCCTCGCGGTGG 28087
Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCC 27624
| | ||| |||||| || | | || |||||| ||||||||||||| | ||||
Sbjct 28086 CCCAGTCCCACGCTGTCCAGGAACGCCCGCGACCCGTTGCCGTCCCAGATCTTGATCCCC 28027
Query 27625 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 27684
|| | ||| ||||| ||| || || |||||| |||||||| | | |
Sbjct 28026 GCGTCTGTCAGCGGCTTGGATGATGTCCTGCCCGAGATGAACCAGAGCAGCTCGGCGATG 27967
Query 27685 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
||||| | ||||| | |||||| |||||||| ||
Sbjct 27966 ACGGCGCGCAGGAAGACGCGCTTGGTTGTGAGGAGTGG 27929
Score = 113 bits (124), Expect = 3e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 27117 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTC 27176
|||||| | ||||||||| || |||| || || || || ||||||||||| |||||
Sbjct 28594 GGGCTCGCGCTCGAGCTGCTGCTGAAGCGCGTCGACATGGTCGAGGTAGACGTGCGCGTC 28535
Query 27177 TCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236
|||| |||||| | | || || | || || |||||| |||| ||||| ||
Sbjct 28534 GCCCATGGTGTGCGTCAGCGAGCCGGGCACCAGGTCGCAGACGTGTGCCAGCATGTGGGT 28475
Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296
||| || | ||||||||| ||||| ||||| || ||||| |||||||| | || | |||
Sbjct 28474 GAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCAGGAGCGCTG 28415
Query 27297 GTAGAGC 27303
||| |||
Sbjct 28414 GTACAGC 28408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369481314634988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |