Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2177 114 9e-21 seq3589 109 4e-19 seq2758 93.3 3e-14 >seq2177 Length=34801 Score = 114 bits (126), Expect = 9e-21 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| ||| |||| || |||||||| ||||| |||| Sbjct 6204 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 6145 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | || | || ||||| ||| ||||| ||| || ||| Sbjct 6144 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 6085 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 6084 --CGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGAC 6027 Query 44326 GAAG 44329 |||| Sbjct 6026 GAAG 6023 >seq3589 Length=6346 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || ||| |||||| ||||||||||| ||||| | || | || || Sbjct 3001 CACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAACGTCCGGCCATCCTC 3060 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || || |||| |||||||| || | || | || ||||| ||| Sbjct 3061 AAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 3120 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || || || | || |||||||| | |||||||||||| Sbjct 3121 AATCTTGGACTTGACGTTGTCGATCGTATCCGAAGACTCCACCTCAAGCGTAATCGTCTT 3180 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||| |||||||| ||||| Sbjct 3181 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 3210 Score = 107 bits (118), Expect = 1e-18 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCG 44185 ||||| ||| || || |||||||||||||||||| || || | ||| || |||| Sbjct 3229 CACCAAGTGCAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCCAACGTTCT-GC-CGTCC 3286 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || |||||||| || ||||| |||| ||||||||||| | || | ||| ||||| || Sbjct 3287 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGATCGGGCGGGATACCCTCCTTGTCT 3346 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| | | | || ||||| | || || || || | |||||| ||| Sbjct 3347 TGGATCTTCGACTTGACGTTGTCAATCGTGTCTGACGACTCGACTTCAAGCGTAATGGTC 3406 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| |||||||| ||||| Sbjct 3407 TTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 3438 Score = 104 bits (114), Expect = 2e-17 Identities = 136/187 (73%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||||||||| |||||| ||||||||||| |||||||| ||| | || || Sbjct 3737 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCA 3796 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| || | || | || ||||| ||| Sbjct 3797 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTG-TCAGGGGGGATGCCCTCCTTGTCCTGG 3855 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| ||| || ||||| | || || ||||| Sbjct 3856 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 3915 Query 44309 CCCGTGA 44315 || |||| Sbjct 3916 CCAGTGA 3922 >seq2758 Length=2532 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||||||| ||||| |||||| ||||||||||| || Sbjct 1693 CATACCGCCGCGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 1634 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| |||| || |||||||| ||||| ||||||| |||||||| || | Sbjct 1633 GGACAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGG 1574 Query 44227 AGGCACACCTTCCTTTTCCGT 44247 || | || ||||| || || Sbjct 1573 GGGGATGCCCTCCTTGTCTGT 1553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359965181322516