Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq157 116 4e-21 >seq157 Length=447866 Score = 116 bits (128), Expect = 4e-21 Identities = 460/719 (64%), Gaps = 6/719 (1%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| || || || ||||| ||||| || ||||| | || || || |||||| Sbjct 174524 TGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCC 174465 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || | | | || ||| || || | Sbjct 174464 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTG--TTGCCGAGTGCGAGGAGCA 174407 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | || || || || || || ||||||||||| | | | |||||| || | || Sbjct 174406 GACGGTCGGCGACGAACTCAATGTATTGGCACATGAGGTTGGCGTTCATGCCGAGCAGG- 174348 Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | || || ||||| || | | || ||||| || || || || | || || Sbjct 174347 GCACAAGGCAGAGCGTCGGAGAGGAACTCCTGCTCGATGGTCACAGCCTCGGTGATGATG 174288 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || || | || || || | || || || ||| || | ||| || ||||| Sbjct 174287 CTCTGTACGAGGTCAGGCGAAGGCTTGTGCTTGAGCTGTGAGAAGAGCAGGCAGGCGAAG 174228 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || || | |||||||| | |||||| ||||| || || || | || | ||| Sbjct 174227 TCAGTGTGCATGCCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTAAGACCAGCCATG 174168 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || || ||||| ||||| || || | ||||||||| ||||| ||||| || || ||| Sbjct 174167 AGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGATGCCTTCG 174108 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 |||| ||||| || | | || |||| | || | | | || | |||||| | Sbjct 174107 ACGGCAGCAAAGGCAACGAGACGGCAGGCGAAGGTGGACTTCTCGTCGCTGATCCATCGC 174048 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 | |||| || || || | ||||| || | || ||||| || || | | | Sbjct 174047 AGAGCCCAGTCAGCCTTCTTACGGATGCAGGGAATGTTGTCGATGGCGTTGAAGAGGTAC 173988 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | | | | |||| | || || || |||||||| ||| ||| | |||||||| Sbjct 173987 TGGCGCTGGCGGACGTCGCTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGG 173928 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 ||||||||||| ||||| || ||||| ||||| || || || | || || || || Sbjct 173927 ATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGGATCTGCACCTCG 173868 Query 17333 ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | ||| || || | || || ||||| || |||||||| |||||||| || || Sbjct 173867 GAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTCAGAGGCGGCGAAGAAGGC 173809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542792315120