Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq416 118 9e-22 seq104 89.7 4e-13 >seq416 Length=196129 Score = 118 bits (130), Expect = 9e-22 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||||||||| ||||||| |||||| |||||| ||||| Sbjct 78468 GTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCCTCAAGCTG 78527 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || ||||||| ||||||||||| ||||| |||||||||||||| || || Sbjct 78528 CTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 78587 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGT 118699 || || | |||| ||||||| ||| ||||||| ||| Sbjct 78588 GCTCTTCACGTTGTCGATAGTGTCCGAAGACTCAACCTCGAGGGT 78632 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| ||||| |||||||| || || | |||||| |||||||| || Sbjct 78240 GTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTGAGAGTGCGACCGTCCTCGAGTTG 78299 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || |||| ||||||||||| || ||||| |||||||||||||| || || Sbjct 78300 CTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 78359 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | ||| ||||||| ||| | || ||||| || Sbjct 78360 GCTCTTCACATTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 78419 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 78420 GAGGGTCTTCACGAAGATCTGCAT 78443 Score = 109 bits (120), Expect = 5e-19 Identities = 153/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| || || || | ||||| Sbjct 78006 CACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTCCTGCCGTCCTC 78065 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| || ||||| || || || || || |||||||||||| Sbjct 78066 GAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCTTG 78125 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || || || | |||| |||||||| || | |||||||||| || | || | Sbjct 78126 AATCTTGGACTTGACGTTGTCGATGGTGTCCGATGAT-TCGACCTCGAGTGTGATAGTCT 78184 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| || ||||| || || || || |||||| Sbjct 78185 TGCCTGTGAGAGTCTTGACGAAGATTTGCATG 78216 >seq104 Length=125481 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | ||||| ||||||||||| || || ||| |||| Sbjct 107679 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 107620 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | ||||| || || || || |||||||||||||| || || || || | ||| Sbjct 107619 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 107560 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | |||||| | | ||||||||||| ||| | || ||||| ||||| || || || || Sbjct 107559 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 107501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828105308328