Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq416 116 3e-21 seq104 100 2e-16 >seq416 Length=196129 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| |||||| |||||| || ||||||||||| | || |||| |||| || ||||| Sbjct 78240 GTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTGAGAGTGCGACCGTCCTCGAGTTG 78299 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||| ||||| ||||| | |||||||||||| || || Sbjct 78300 CTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 78359 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| | ||||||||| | ||| || |||||||| || Sbjct 78360 GCTCTTCACATTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 78419 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| ||||| ||||| Sbjct 78420 GAGGGTCTTCACGAAGATCTGCAT 78443 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| ||||||||||| || | |||| || Sbjct 78007 ACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTCCTGCCGTCCTCG 78066 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | ||||||||||| || || | |||||||||||| | Sbjct 78067 AGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGA 78126 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| || ||||| | || || |||||| Sbjct 78127 ATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGACCTCGAGTGTGATAGTCTTG 78186 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || |||||||| || |||||||||||| Sbjct 78187 CCTGTGAGAGTCTTGACGAAGATTTGCATG 78216 >seq104 Length=125481 Score = 100 bits (110), Expect = 2e-16 Identities = 137/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| || ||| |||| || || || || |||||||| | Sbjct 107681 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 107622 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 |||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 107621 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 107562 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| ||| ||||| | ||| || |||||||||||||| ||||| || | Sbjct 107561 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 107502 Query 45327 AGAT-TTGCA 45335 || | ||||| Sbjct 107501 AGCTGTTGCA 107492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073110299114