Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq157 91.5 3e-13 seq127 87.8 4e-12 >seq157 Length=447866 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| || ||||| |||||||| ||| | ||||| || || |||||| Sbjct 174091 GTTGCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGG 174150 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | || | || ||||||| |||| |||||| ||| | || ||| | ||| Sbjct 174151 TTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGCTTATCTCTCGTGAC 174210 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || || | || ||||| || ||| |||| || Sbjct 174211 GAGGGCATGCACACTGACTTCGCCTGCCTGCTCTT 174245 >seq127 Length=55032 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 ||| ||| ||| || |||||||||| ||||| ||||| ||||| | ||| |||| ||| Sbjct 47663 GCCCTCACGCTCGTACTTCTCGTACAGCGCCTCGAACTCCTCGCCGTAGACATCGGCAAG 47604 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCAATT 94493 || ||||||||||| ||||||||||| | ||| || Sbjct 47603 ACCGGGGCACTCGTGAGGGCACATCAGAGTCCAGTT 47568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578497294470