Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq157 86.0 6e-12 >seq157 Length=447866 Score = 86.0 bits (94), Expect = 6e-12 Identities = 346/534 (65%), Gaps = 11/534 (2%) Strand=Plus/Plus Query 52532 TCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGA 52591 ||||||| | ||||| |||| || | || || |||| ||| ||||| || ||||| Sbjct 173996 TCAACGCCATCGACAACATTCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGATGGA 174055 Query 52592 TCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTG 52651 || |||| || |||| || ||| ||||| || || |||||| || ||||| Sbjct 174056 TCAGCGACGAGAAGTCCACCTTCGCCTGCCGTCTCGTTGCCTTTGCTGCCGTCGAAGGCA 174115 Query 52652 TGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCC 52710 | || || || || || || | || || | | || || | ||| | | ||| | Sbjct 174116 TCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGTTGAAGAAGCGTGGCC-TCATGGCT 174174 Query 52711 GGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCG 52770 || || || || ||||||| | || || || ||||| || |||||||| || || || Sbjct 174175 GGTCTTACCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGCATGCACACTGACTTCGCC 174234 Query 52771 TGTTTG-TATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCTAGA-CA 52828 || || | || | | | || | || | || || ||| | | ||| || Sbjct 174235 TGCCTGCTCTTCTCACA---GC-TCAAGCACAAGCCTTCGCCTGACCTCGTAC-AGAGCA 174289 Query 52829 TGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCAT 52888 | | | ||||| || ||| || | ||||| | | |||||| | || | Sbjct 174290 TCATCACCGAGGCTGTGACCATCGAGCAGGAGTTCCTCTCCGACGCTCTGCCTTGTGCCC 174349 Query 52889 TGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGT 52948 || | ||||||||||| | | | |||||| | ||||| ||||| || || ||| | ||| Sbjct 174350 TGCTCGGCATGAACGCCAACCTCATGTGCCAATACATTGAGTTCGTCGCCGACCGTCTGC 174409 Query 52949 TGAT-GCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAAC 53007 | | ||| ||||| | ||| | ||| || || |||||||| || ||| | Sbjct 174410 TCCTCGCA-CTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAG 174468 Query 53008 AACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||||| || || | ||||| || ||||| ||||||| ||||| ||||||||| Sbjct 174469 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTAC 174522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061308852800