Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq157 104 3e-17 >seq157 Length=447866 Score = 104 bits (114), Expect = 3e-17 Identities = 360/558 (65%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || ||||| |||||||| | | || || |||||||| || || || Sbjct 174236 CAGGCGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTAAGA 174177 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || | ||| ||||||||||| || | ||| || || || || || || ||||| |||||| Sbjct 174176 CCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAG 174117 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATGT 50136 || ||||| || || ||||||||||| || | | | ||| | ||| Sbjct 174116 ATGCCTTCGACGGCAGCAAAGGCAACGAGACGGCAGGCGAAGGTGGACTTCTCGTCGCTG 174057 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||||| || |||||||| | || || || | || ||||| || Sbjct 174056 ATCCATCGCAGAGCCCAGTCAGCCTTCTTACGGATGCAGGGAATGTTGTCGATGGCGTTG 173997 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 ||||| || | | || | | || || ||||| | || || | Sbjct 173996 AAGAGGTACTGGCGCTGGCGGACGTCGCTGATGTAGGTGTCGATGAGGAGGGAGTAGGTC 173937 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || ||||| || || ||||| || |||||||| || | |||||| | ||| Sbjct 173936 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGGATC 173877 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 ||||| || | | || || || | | || || || || || |||||| ||| || Sbjct 173876 TGCACCTCGGAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTCAGAGGCGGCG 173817 Query 50377 AAAAACGCCAATACATGT---TTTATAAAATGTTTTTCGTTGGGTGTTA-GTTTATTCCA 50432 || || || | || ||| | | ||| | | ||| | | || | | || ||||| Sbjct 173816 AAGAAGGCGAGCACGTGTGAAATGAAGAAACGCTCATCG-TCGTTGAGACGCTTGTTCCA 173758 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | | ||| || || | ||| | || || ||||||| || || ||||| ||||| Sbjct 173757 GTCGTGAAGATCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAGGAAGCCTCGGCCTT 173698 Query 50493 TTTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 173697 CTTGTACATTTGCCAGAT 173680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264903391760