Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq157 268 1e-66 seq127 150 3e-31 >seq157 Length=447866 Score = 268 bits (296), Expect = 1e-66 Identities = 586/863 (68%), Gaps = 31/863 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| ||||| ||||| | || ||| | ||||| Sbjct 173680 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCAGAGGAGATTGATCTC 173739 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||| | | || |||||| || || || Sbjct 173740 TCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGACGATGAGCGTTTCTTCATTTCA 173799 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | |||||||| |||| ||| || || || |||||||| || || || || || Sbjct 173800 CACGTGCTCGCCTTCTTCGCCGCCTCTGACGGCATTGTCAACGAGAACCTTGTCGAG-CG 173858 Query 125198 ATTCT-CTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 ||| ||| ||| || || || |||| ||| ||||| ||||| ||||| |||||| Sbjct 173859 CTTCAGCTCC-GAGGTGCAGATCCCTGAGGC-TCGCTGCTTCTACGGCTTCCAGATCATG 173916 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA--TC 125313 || |||||| | ||||| || | ||||| || || |||| ||||| |||| || Sbjct 173917 ATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAGCGACGTC 173976 Query 125314 CGCAA-CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 ||| | || | || ||||| ||||| ||||||| | || | || ||||| ||| Sbjct 173977 CGCCAGCGCCAGTAC---CTCTTCAACGCCATCGACAACATTCCCTGCATCCGTAAGAAG 174033 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| | || |||||| ||||| ||||| | | |||| | | || || Sbjct 174034 GCTGACTGGGCTCTGCGATGGATCAGCGACGAGAAGTCCACCTTCGCCTGCCGTCTCGTT 174093 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || ||||| || ||||||||||| || || || || | ||||| ||| | Sbjct 174094 GCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGTTG 174153 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || |||||| | || || || | |||||| |||| ||||| |||||| Sbjct 174154 AAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGCTTATCTCTCGTGACGAG 174213 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAG 125611 ||| | ||| |||||| ||| || || || || || || | || || Sbjct 174214 GGCATGCACACTGACTTCGCCTGCCTGCTCTTCTCACAGCT----------CAAGCACA- 174262 Query 125612 ATCCAGCG-ATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670 | || || ||| || | ||| | ||||| || |||| || || || |||| Sbjct 174263 AGCCTTCGCCTGACCTCGTACAGAGCATCATCACCGAGGCTGTGACCATCGAGCAGGAGT 174322 Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGT 125730 | || |||| | || || | || | ||||||||| ||| || |||||| | | Sbjct 174323 TCCTCTCCGACGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAACCTCATGTGCCAAT 174382 Query 125731 ACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTACA 125787 |||| ||||| || || || ||||| || || | ||| ||||| | |||| Sbjct 174383 ACATTGAGTTCGTCGCCGACCGTCTGCTCCTCG---CACTCGGCAACAAGAAGTTCTACA 174439 Query 125788 ACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTT 125847 |||||| || ||||| || |||||| | ||| || || | || ||||||||||| | Sbjct 174440 ACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCT 174499 Query 125848 TCGAGAAGAAGGTCAGCGAGTAC 125870 |||||||| ||| |||||||| Sbjct 174500 TCGAGAAGCGTGTCGGCGAGTAC 174522 >seq127 Length=55032 Score = 150 bits (166), Expect = 3e-31 Identities = 304/446 (68%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | || ||||| | || || |||||||| ||| Sbjct 47391 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCTATCTACCTCGAGCCATGGCACGCCGAC 47450 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 | || ||| | || | ||||| ||| ||| ||||| | || || | ||| Sbjct 47451 ATCATTCCCTTCCTGGACCTTCGCAAGAACCACGGCAAGGAAGAAGTCCGTGCTCGTGAC 47510 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || || ||| | || || |||||||||||||| || | | ||| || Sbjct 47511 CTCTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGCGTGTGGAACAGAACGGCAAC 47570 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || |||||||| || || |||||||| ||||| || ||||| ||||| Sbjct 47571 TGGACTCTGATGTGCCCTCACGAGTGCCCCGGTCTTGCCGATGTCTACGGCGAGGAGTTC 47630 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174 ||||| |||| | ||||||| |||||||| || ||||| | || |||| Sbjct 47631 GAGGCGCTGTACGAGAAGTACGAGCGTGAGGGCCGTGGTCGCGAGACTA-TCCGCGCAC- 47688 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| | ||| | |||||| | ||||||||| ||||| || | || | ||| || | Sbjct 47689 AGAAGGTCTGGTACGCCATCCTCGAGGCTCAGGTCGAGACCGGCAACCCCTTCATGCTTT 47748 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293 |||| ||| | | || ||||| |||||||| || |||||||||| |||||| Sbjct 47749 ACAAAGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTCGCAGCTCCA 47808 Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319 | ||||||| || || | |||||| Sbjct 47809 ACTTGTGCACAGAGATCATCGAGTAC 47834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055179753840