Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq127 122 1e-22 seq157 109 7e-19 >seq127 Length=55032 Score = 122 bits (134), Expect = 1e-22 Identities = 400/614 (65%), Gaps = 6/614 (1%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||| || || | |||| | | | || || || || | || ||||||| | | Sbjct 47632 TCGAACTCCTCGCCGTAGACATCGGCAAGACCGGGGCACTCGTGAGGGCACATCAGAGTC 47573 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || | |||| | | ||| || ||||| || | || || ||||| || || || Sbjct 47572 CAGTTGCCGTTCTGTTCCACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAAG 47513 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | | | ||| || || || ||||| ||| || ||||| | || Sbjct 47512 AGGTCACGAGCACGGACTTCTTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAAGGGAATG 47453 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 || || | ||||| || || | ||| || || | | || || || ||||| || ||| Sbjct 47452 ATGTCGGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCGGGGCGCTTGTTGCCACCC 47393 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||| | ||||||||| || ||||| | | ||| |||| | |||||| || Sbjct 47392 TGGTCGACGTAACGAGCGGTGTTGTTGTAAACACGAAGCATGGGAACGAGACCGTTGGAG 47333 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63496 |||| ||||| ||| || || ||| |||||||||| | | || | ||||| Sbjct 47332 GTACCGTTGGTGCCGCCAATGTAAGCACCAGTGGCACGAATGCGG-TGAGTGTTGAGACC 47274 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || || | || ||||| | ||||| ||| | ||||| ||||||||||| Sbjct 47273 AATACCACCAGCGTTCTTGGAGATCATGGCGCAGATTTTGAGAGTGTCGTAGATACCCTC 47214 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC-GACTAGTTC 63615 ||||| ||||| |||||| | || || ||| | || ||| | || || | Sbjct 47213 AATGCTGTCATCCTTCATGTCGATAAGGAAGCAG-GACGCAAGCTGTGCCTGAGGGGTAC 47155 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTAC 63674 | || | || | ||||| || || || ||||| | || | || | |||| ||||| Sbjct 47154 CTGCGCTGAAGAGCGTAGGGGAGGCATGTGTAAAGTACTTGTTGGACATGTAG-TTGTAG 47096 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 ||||| || || | || || || || || || || || || ||||| | |||| Sbjct 47095 GTCTCGATCGCGGCCTCGATGTCGTCGCCGTGGATACCGACAGCAACTCGCATGATCATG 47036 Query 63735 TGCTGAGGTCTTTC 63748 ||||| ||||| || Sbjct 47035 TGCTGTGGTCTCTC 47022 >seq157 Length=447866 Score = 109 bits (120), Expect = 7e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||||| |||||||| | | || || |||||||| || || || Sbjct 174236 CAGGCGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTAAGA 174177 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || | ||| ||||||||||| || | ||| || || || ||||| || ||||| |||||| Sbjct 174176 CCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAG 174117 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAA 33448 || ||||| || ||||||||||||| Sbjct 174116 ATGCCTTCGACGGCAGCAAAGGCAA 174092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943820511440