Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq127 358 2e-93 seq152 91.5 4e-13 >seq127 Length=55032 Score = 358 bits (396), Expect = 2e-93 Identities = 1126/1727 (65%), Gaps = 42/1727 (2%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || ||||| ||| | ||||| |||||| | |||||||| || || | || |||||| Sbjct 47028 CCACAGCACATGATCATGCGAGTTGCTGTCGGTATCCACGGCGACGACATCGAGGCCGCG 47087 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAATGT 363571 || || || || || || | | || | | ||| || || || ||| | || || | | Sbjct 47088 ATCGAGACCTACAA-CTAC-ATGTCCAACAAGTACTTTACACATGCCTCCCCTACGCTCT 47145 Query 363572 ACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACG 363631 || || || || | | | ||||| | | || ||||| ||| | | |||||||| | Sbjct 47146 TCAGCGCAGGTACCCCTCAGGCACAGCTTGCGTCCTGCTTCCTTATCGACATGAAGGATG 47205 Query 363632 ATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAG 363691 | ||| |||||||||| ||||| || || | || || | || |||||||| || | Sbjct 47206 ACAGCATTGAGGGTATCTACGACACTCTCAAAATCTGCGCCATGATCTCCAAGAACGCTG 47265 Query 363692 GCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG-TTACATTCGCGGCACA 363750 | || |||||| | | ||| ||||||| || | ||||||| ||||||| Sbjct 47266 GTGGTATTGGTCTCAACACTCACCGCATTCGTGC-CACTGGTGCTTACATTGGCGGCACC 47324 Query 363751 GGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTAC 363810 || ||| || || || ||||||||||||||||| | |||| || || | ||| Sbjct 47325 AACGGTACCTCCAACGGTCTCGTTCCCATGCTTCGTGTTTACAACAACACCGCTCGTTAC 47384 Query 363811 GTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCAT 363870 |||||||||||||| |||||| || || |||||||| || |||||||| || Sbjct 47385 GTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCTATCTACCTCGAGCCATGGCAC 47444 Query 363871 GCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCA 363930 ||||| || || || || || || || || ||| || || || ||| | ||||| Sbjct 47445 GCCGACATCATTCCCTTCCTGGACCTTCGCAAGAACCACGGCAAGGAAGAAGTCCGTGCT 47504 Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGT 363990 ||||| || ||||| || || ||| | | ||| || |||||||| ||||| ||| Sbjct 47505 CGTGACCTCTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGCGTGTGGA-ACAGAA 47563 Query 363991 AAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGA 364049 | || ||| | || | ||||| ||||| || || |||||| ||||||| | || || Sbjct 47564 CGGCAACTGGACTCTGATGTGCCCTCACGAGTGCCCCGGTCTTGCCGATGTCTACGGCGA 47623 Query 364050 CGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCC 364109 || | | || || ||||| ||||| || ||||| | ||| |||| || | Sbjct 47624 GGAGTTCGAGGCGCTGTACGAGAAGTACGAGCGTGAGGGCCGTGGTCGCGAGACTATCCG 47683 Query 364110 CGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATAT 364169 |||||||||| | |||| |||||| | || | ||| | ||||| || | |||| || Sbjct 47684 CGCACAGAAGGTCTGGTACGCCATCCTCGAGGCTCAGGTCGAGACCGGCAACCCCTTCAT 47743 Query 364170 GTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCA 364229 | | ||||||||| | |||||||||| ||||||| || |||| || || |||| ||| Sbjct 47744 GCTTTACAAAGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTC-GCA 47802 Query 364230 G-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTA 364288 | |||| | || || ||||| || || ||||| || || || ||| ||||| || | Sbjct 47803 GCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAGGTCGCCGTGTGCA 47862 Query 364289 ACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---------AAAAGATGGTACTTTTGACC 364339 ||||||| || |||| ||||| | | ||| || || | || ||| Sbjct 47863 ACCTTGCTTCTCTCGCTCTTCCCACCTATGTTGACATTCCCAACGAGCG---CTTCGACT 47919 Query 364340 ACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACA 364399 | || | ||| | || || | | | || || | ||||| |||||| Sbjct 47920 TCAAGAAGCTTCACGAGGTCGTCCAGGTCGTCACCAAGAACTTGAACAAGTGTATCGAGG 47979 Query 364400 AGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGAT 364454 || | || || | || || || ||| || ||||| || || || || Sbjct 47980 TCAACCACTACCCCGTCATCGAGGCACGCAACAGC-----AACATGCGACACCGTCCTAT 48034 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGAT 364512 ||||| ||||| || |||||||| | || | ||||| ||| | || || Sbjct 48035 CGGTCTCGGTGTGAGCGGTCTCGCTGATGCCTTCCT--TGCTCTGCGCATGCCTTTCGAG 48092 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 ||||| || || || || || | |||||||||| || || || || || | Sbjct 48093 TCGCCCGAGGCCCGCCAGCTCAACATCCAGATCTTTGAGACCATCTACCACGCTGCCCTT 48152 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 |||||||| || ||| | || | | |||| ||| || || | || ||||| Sbjct 48153 ACTGCTTCTTGCGATCTTGCTGAGAAGCTTGGAACGTATGAGACCTACGCTGGCTCCCCC 48212 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 || |||| | |||||| || | ||| ||| || || || | | ||| || Sbjct 48213 GCCTCCAAGGGTGAGCTCCAGTACGACATGTGGGGTGTGACCCCGTCCGATCTTTGGGAC 48272 Query 364693 TGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTACA 364749 ||||| | || ||| || |||| ||| |||||||||| |||||| Sbjct 48273 TGGGAGGCACTCAAGGCCAGGATTGCCGAGCACGGTCTTCGCAACTCCCTTCTCGTT--- 48329 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || ||||| || ||| ||| | |||||| | || ||||||||||||||| ||| Sbjct 48330 GCTCCTATGCCTACTGCTAGCACTTCGCAGATCATGGGCTTCAACGAGTGCTTCGAGCCG 48389 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||||| | || || || || |||||| |||| || || | ||| || || Sbjct 48390 TACACCAGCAACATCTACTCCCGTCGTGTTCTTGCCGGCGAGTTCCAGGTTGTCAACCCT 48449 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | | ||||||||||| ||||||||| |||||| | |||| |||||||||| ||| Sbjct 48450 TGGTTGCTCAAGGATCTTGTCGACCGCGGCCTGTGGAGCGACAACATGAAGAACCGCATC 48509 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 || |||| ||||| | ||| ||| || | || || || | ||| || Sbjct 48510 ATTGCCGACGGCGGTTCCATCCAGCGCATCCCCAACATCCCGGATGACATCAAGATCCTT 48569 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 ||||| || || ||||||||| | ||| || | | ||||| ||||| || ||| Sbjct 48570 TACAAGACTGTCTGGGAAATTAGCCAGCGTCAAATCGTCCAGATGGCCGCCGACCGTGGT 48629 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 || |||||| ||| ||||| | ||| | |||| |||| ||| | |||| Sbjct 48630 GCCTTTATCGATCAATCGCAGTCACTCAACATCCACATGCAGGAGCCCACCATGGGCAAG 48689 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || || ||||| || || ||||| |||||||||||| || Sbjct 48690 ATCACTTCTATGCACTTTGCTGGTTGGAAGCTCGGTCTTAAGACTGG 48736 >seq152 Length=48256 Score = 91.5 bits (100), Expect = 4e-13 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 111417 AATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC 111476 ||||| || || ||||| || |||| ||| | | | ||| ||||| || ||||| || Sbjct 27109 AATGTGAAGATCTGGGACGGCAATGCCTCAAGGCAGTATCTGGATTCTGTCGGTCTC-TC 27167 Query 111477 G-ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGC 111535 | || ||||||||| |||||||| || || ||||| || || |||||||||||||| || Sbjct 27168 GCACCGCGAAGAAGGCGATCTCGGCCCCGTGTACGGCTTCCAGTGGCGCCACTTTGGCGC 27227 Query 111536 AGACTAC 111542 ||| ||| Sbjct 27228 AGAGTAC 27234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346352539388