Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq157 181 1e-40 seq416 127 2e-24 seq104 96.9 3e-15 seq98 93.3 4e-14 >seq157 Length=447866 Score = 181 bits (200), Expect = 1e-40 Identities = 352/514 (68%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || || ||| | || ||||| | |||||||| || ||||||| | | | | Sbjct 174013 ATTCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGATGGATCAGCGACGAGAAGTCC 174072 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || |||||| ||| | || |||||||| || || ||| |||| || |||||| Sbjct 174073 ACCTTCGCCTGCCGTCTCGTTGCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCTCG 174132 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 || ||| | ||||| | | || | ||| ||||| | || || || || |||| Sbjct 174133 TTCGCCTCTATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAAC 174192 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC 46322 ||||| || || || ||||||||| |||| || ||||| || || || || | | ||| Sbjct 174193 GAGCTTATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTGCTCTTCTCACAG 174252 Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382 | | |||| |||| | |||| ||| ||| | |||||| ||| ||||| ||| | Sbjct 174253 -CTCAAGCAC---AAGCCTTCGCCTGACCTCGTACAGAGCATCATCACCGAGGCTGTGAC 174308 Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACA 46442 ||| ||| ||||||| | | | ||| ||||| ||||||||| ||||||||||| | Sbjct 174309 CATCGAGCAGGAGTTCCTCTCCGACGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAA 174368 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT-GCAGCTTCACCAGC 46501 |||||| | ||||| ||||| || || ||||| |||||| | ||| || | | Sbjct 174369 CCTCATGTGCCAATACATTGAGTTCGTCGCCGACCGTCTGCTCCTCGCA-CTCGGCAACA 174427 Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561 |||| | |||| ||| || || || || ||| | ||||||||||| | |||| Sbjct 174428 AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCA 174487 Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | || || || ||||| ||||| ||||||||||| Sbjct 174488 AGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTA 174521 >seq416 Length=196129 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || || | || | || ||||||||||| |||||||| || || Sbjct 78216 GCCACCGCGAAGACGAAGGACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACT 78275 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| || |||||||| || |||| | |||||||||||||||||| Sbjct 78276 GAGAGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGG 78335 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||| | | || | ||| |||| ||||| | Sbjct 78336 AATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAAGACTCCAC 78395 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || ||||| |||||||| Sbjct 78396 CTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| ||||| | || | ||||||||||| || |||||||| || Sbjct 77988 GCCACCGCGAAGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 78047 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| | |||||| |||||||| || ||| |||| | ||||| ||||| || || Sbjct 78048 CAAGGTCCTGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGG 78107 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||||| | || | || || | || |||| Sbjct 78108 GATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGAC 78167 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | || || || || ||||| || ||||| || |||||| Sbjct 78168 CTCGAGTGTGATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCATG 78216 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||| ||||||||||| |||||| Sbjct 78445 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 78504 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | |||||||| |||||||| Sbjct 78505 AAAGTGCGACCATCCTCAAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGA 78564 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | ||| || | ||||| | Sbjct 78565 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATAGTGTCCGAAGACTCAACC 78624 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 78625 TCGAGGGTGATGGTCTTTCCCGT 78647 >seq104 Length=125481 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | |||||| |||||| ||||||||||| ||| ||| Sbjct 107681 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 107622 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||| |||||||| || || || || ||||| ||| || ||| | | | Sbjct 107621 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 107562 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 107561 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 107502 Query 131225 A 131225 | Sbjct 107501 A 107501 >seq98 Length=448780 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||||| || |||||||| || Sbjct 219571 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 219512 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| || ||||| |||||||| ||| Sbjct 219511 AGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCCGGGGGG 219452 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 219451 ATACCCTCCTTGTC 219438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010239330560