Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq246 136 3e-27 seq88 136 3e-27 >seq246 Length=8397 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct 6465 AAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6406 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6405 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6371 >seq88 Length=133896 Score = 136 bits (150), Expect = 3e-27 Identities = 206/293 (70%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 6194 GGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAA 6253 ||| || |||||||| ||||| ||| | ||| ||||| ||||||| ||||| || Sbjct 3266 GGATGCCTTCTACCGTTACAAGATGGAGAAGATCCAGTCCAAGATCGAGGGCAAGGGCAA 3325 Query 6254 CGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGC 6313 |||||| || |||||||| |||||| | | | || || | ||| | ||||| | Sbjct 3326 CGGTATCAAGACCGTCATCGTCAACCTCCACAATGTGGCCGACCAGCTTGCCCGCCCGCC 3385 Query 6314 CACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373 | ||| | ||||| ||||| | ||| |||||||| ||||| | | || | ||| Sbjct 3386 GAACTATGTCATCAAATACTTCGGTTTCGAGCTTGGCGCCCAGACCAACATCGACCCCAA 3445 Query 6374 AAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGA 6433 |||| |||| || || ||||| |||| | || |||||||||||||| || || Sbjct 3446 GGACGACCGCTGGATTGTCAACGGCGCGCACGAGGCTTCCAAGCTGCAGGACCACCTCGA 3505 Query 6434 CGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 |||||| || |||||| || || || |||| ||| | ||||| ||||||| Sbjct 3506 CGGCTTCATCAACAAGTTCGTCCTCTGCAGGGACTGCAAGAACCCCGAGACCG 3558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945428338654