Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq416 118 9e-22 seq104 84.2 2e-11 >seq416 Length=196129 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| |||| |||||||| || Sbjct 78443 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCC 78384 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| || ||| ||||| || || ||||| || ||||| Sbjct 78383 GACACTATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 78324 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| ||| | || || | ||||||| | | || ||||| Sbjct 78323 CAGCGTCTGATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACTCTCAGTGACTACAAC 78264 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || ||||| || |||||||| || Sbjct 78263 ATCCAAAAGGAGTCCACGCTCCA 78241 Score = 102 bits (112), Expect = 7e-17 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092 ||||||| |||| || ||||| || ||||||||||| ||||| || ||| | Sbjct 78637 CCATCACCCTCGAGGTTGAGTCTTCGGACACTATCGACAACGTGAAGAGCAAGATCCAGG 78578 Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152 |||| || || ||||| || || || ||||| | || ||||| ||||| || | || | Sbjct 78577 ACAAGGAGGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCGGGCAAGCAGCTTGAGG 78518 Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 ||| ||||||| || |||| ||||| ||||| || || ||||| || || Sbjct 78517 ATGGTCGCACTTTGAGCGACTACAACATTCAGAAGGAGTCCACCCTCCA 78469 >seq104 Length=125481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| |||| || || ||||||| |||| || ||||| |||||||| ||| Sbjct 107501 TTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 107560 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || ||||| || ||| ||||| || || ||||| || ||||||||||| | Sbjct 107561 GACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCTTG 107620 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || |||||||| || | || || | ||||| | ||| ||||| || || || Sbjct 107621 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 107679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325707965710