Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq416 134 3e-26 seq157 105 2e-17 >seq416 Length=196129 Score = 134 bits (148), Expect = 3e-26 Identities = 172/233 (74%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | ||| ||||| || | |||| || |||||||| || |||| Sbjct 78213 CATG-CCACCGCGAAGACGAAGGACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGT 78271 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||| ||||| ||||| || | ||| || || || |||||||||||||| || Sbjct 78272 CACTGAGAGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCG 78331 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420 || || || || || |||||||| || ||| ||||| || || |||| ||| || Sbjct 78332 GAGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTCGATAGTGTCGGAAGAC 78390 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 78391 TCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 Score = 100 bits (110), Expect = 7e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || |||||||| || | || || || |||| || || || ||||| || ||||| Sbjct 77986 TGGCCACCGCGAAGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCC 78045 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | | || | ||||| || | || || || |||||||| || |||||||| | Sbjct 78046 GACAAGGTCCTGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGT 78105 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || || || || || | || ||||| || || | || ||||| Sbjct 78106 GGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCG 78165 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct 78166 ACCTCGAGTGTGATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 78215 >seq157 Length=447866 Score = 105 bits (116), Expect = 2e-17 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157 || || || || | ||| | |||||| | | |||||| | || ||| | || |||| Sbjct 174298 GAGGCTGTGACCATCGAGCAGGAGTTCCTCTCCGACGCTCTGCCTTGTGCCCTGCTCGGC 174357 Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCA 269217 ||||| ||| | |||||| ||||| || || ||||| || || ||| | || ||| Sbjct 174358 ATGAACGCCAACCTCATGTGCCAATACATTGAGTTCGTCGCCGACCGTCTGCTCCTCGCA 174417 Query 269218 CTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCG 269277 ||||| | |||| | ||||| | | || ||||||| ||| ||||| || || Sbjct 174418 CTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCC 174477 Query 269278 CTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTA 269337 || | || ||||| ||||||||||| ||||||||| |||| || || ||||||| Sbjct 174478 CTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTACCAGAAGGCTGGTGTC 174537 Query 269338 ATG 269340 ||| Sbjct 174538 ATG 174540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179647840384252