Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq157 116 8e-21 seq430 84.2 5e-11 >seq157 Length=447866 Score = 116 bits (128), Expect = 8e-21 Identities = 177/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | ||| |||| ||| | | ||||||| | || || Sbjct 174289 ATCATCACCGAGGCTGTGACCATCGAGCAGGAGTTCCTCTCCGACGCTCTGCCTTGTGCC 174348 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||| | | |||||| | || ||||| || ||||| |||||||| | Sbjct 174349 CTGCTCGGCATGAACGCCAACCTCATGTGCCAATACATTGAGTTCGTCGCCGACCGTCTG 174408 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| || || | |||| | |||||| ||| |||||||| | ||| |||||| Sbjct 174409 CTCCTCGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAG 174468 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || ||| || || || ||||||||||| ||||||||| | || || || Sbjct 174469 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTACCAGAAG 174528 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 174529 GCTGGTGTCATG 174540 >seq430 Length=48834 Score = 84.2 bits (92), Expect = 5e-11 Identities = 178/265 (67%), Gaps = 3/265 (1%) Strand=Plus/Minus Query 333729 ACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATA 333788 |||||||| | || || |||||||| |||||||||| || | ||||| || | | Sbjct 24348 ACGAACTCAGCAAGGTTACCCTTGTAGCTCTTCAGCTTC---TTCTGCTCGTAGTGCAGA 24292 Query 333789 ATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACG 333848 || ||||| || |||||||||| ||||||||||| || || || | | | | | | Sbjct 24291 ATGTCTGTGCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAGACGATGAGGGAGGTGATG 24232 Query 333849 TCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTG 333908 || | || | | ||||| || |||||| | | ||| | ||| ||||||||| Sbjct 24231 TCGGTGTGGGTCTTGAGGTAGTCCTGGAGCCACTTGATGTTGGCGACATCGAGATGGTTG 24172 Query 333909 GTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGT 333968 || || ||||| || || | | | || || | ||| || || || | ||| | Sbjct 24171 GTAGGTTCGTCGAGGAGGAAGACATCAGCACGCATCAACATGGCGCGGGCCAAAGCCAAC 24112 Query 333969 TTCATTTTCCACCCTCCTGAAAGAG 333993 ||||| ||||| || || || |||| Sbjct 24111 TTCATCTTCCAACCACCAGACAGAG 24087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102873867297900