Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq127 194 2e-44 seq157 118 1e-21 >seq127 Length=55032 Score = 194 bits (214), Expect = 2e-44 Identities = 890/1398 (64%), Gaps = 39/1398 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| ||||| |||||||| ||| |||| ||| || | ||| Sbjct 48406 TAGATGTTGCTGGTGTACGGCTCGAAGCACTCGTTGAAGCCCATGATCTGCGAAGTGCTA 48347 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || || | ||||||| ||| || ||||| | || ||| | || Sbjct 48346 GCAGTAGGCATAGGAGCAACGAGAAGGGAGTTGCGAAGACCGTGCTCGGCAATCCTGGCC 48287 Query 114062 TTGAGGGCGTCCCAGTCGTAG---TTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 114118 ||||| || |||||||| | | | | ||| | ||| ||||| || ||||| Sbjct 48286 TTGAGTGCCTCCCAGTCCCAAAGATCGGACGGGGTCACACCC---CACATGTCGTACTGG 48230 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 || ||| | |||||| || || || | | ||||| || | || ||| || Sbjct 48229 AGCTCACCCTTGGAGGCGGGGGAGCCAGCGTAGGTCTCATACGTTCCAAGCTTCTCAGCA 48170 Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT- 114237 | ||| | || ||||| ||||| || || |||||||| || | || | Sbjct 48169 AGATCGCAAGAAGCAGTAAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGC 48110 Query 114238 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGAC 114296 || | ||||||| || || || | | || || | || || |||| ||||||| Sbjct 48109 TGGCG-GGCCTCGGGCGACTCGAAAGGCATGCG-CAGAGCAAGGAAGGCATCAGCGAGAC 48052 Query 114297 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA--- 114353 | |||||||| || || || || |||| ||| || || || || ||| | Sbjct 48051 CGCTCACACCGAGACCGATAGGACGGTGTCGCATGTTGCTGTTGCGTGC---CTCGATGA 47995 Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 114413 |||| || || |||||| | | || | || |||||||| |||| || | Sbjct 47994 CGGGGTAGTGGTTGACCTCGATACACTTGTTCAAGTTCTTGGTGACGACCTGGACGACCT 47935 Query 114414 CATGAAGCTTTTCGTAATCAAAAC------TGCGAGTCTCTTCATTGACATACTTAGGAA 114467 | |||||||| | | | || || | || || | || ||||| | |||| Sbjct 47934 CGTGAAGCTTCTTGAAGTCGAAGCGCTCGTTGGGAATGTCA------ACATAGGTGGGAA 47881 Query 114468 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 | |||| || || || || ||||| | | |||||| |||||||||| || || | Sbjct 47880 GAGCGAGAGAAGCAAGGTTGCACACGGCGACCTCATCAGGTGCAGTGTACTCGATGATCT 47821 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | || ||||| || || || ||||||||||| |||||| || || ||| ||| Sbjct 47820 CTGTGCACAAGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGG 47761 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 ||||| |||||||||||| | || | || ||||| || | || ||| || || | Sbjct 47760 CAGCATCTTTGTAAAGCATGAAGGGGTTGCCGGTCTCGACCTGAGCCTCGAGGATGGCGT 47701 Query 114648 TCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 114707 |||||| | || | | ||| || | || ||||| ||||||||| || Sbjct 47700 ACCAGACCTTCTGTGCGCGGATAGTCTCGCGACCACGGCCCTCACGCTCGTACTTCTCGT 47641 Query 114708 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 114767 | || || || ||||| || || | | || | || || || || | ||||| | Sbjct 47640 ACAGCGCCTCGAACTCCTCGCCGTAGACATCGGCAAGACCGGGGCACTCGTGAGGGCACA 47581 Query 114768 AGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 |||| ||| | || || || |||||||||||||| | ||| |||||||| || | Sbjct 47580 TCAGAGTCCAGTTGCCGTTCTGTTCCACACGCTTCATGAACAAGTCGGGGATCCACAGGG 47521 Query 114828 CTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 114887 | ||||||| || ||| || ||||||| | || || || || | |||| | Sbjct 47520 CGTAGAAGAGGTCACGAGCACGGACTTCTTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 47461 Query 114888 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTAC 114941 || ||||| || |||||||| || || ||||| | || | | || | ||| Sbjct 47460 AGGGAATGATGTCGGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCGGGGCGCTT-- 47403 Query 114942 GACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 | | ||| |||||| || || | || ||| || | || |||||||| |||| || Sbjct 47402 GTTG-CCACCCTGGTCGACGTAACGAGCGGTGTTGTTGTAAACACGAAGCATGGGAACGA 47344 Query 115002 TACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGA 115061 ||| | || || || || || | ||| || | |||| | | || Sbjct 47343 GACCGTTGGAGGTACCGTTGGTGCCGCCAATGTAAGCACCAGTGGCACGAATGCGGTGAG 47284 Query 115062 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 115121 ||| | ||||||||| || || ||| ||||| ||||| ||||| || ||| Sbjct 47283 TGTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGCGCAGATTTTGAGAGTGTCGT 47224 Query 115122 AGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCC 115181 |||| || || || |||| |||| | |||||||||||||| || | |||| | Sbjct 47223 AGATACCCTCAATGCTGTCATCCTTCATGTCGATAAGGAAGCAGGACGCAAGCTGTGCCT 47164 Query 115182 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 115240 || ||||| ||| ||||||| || || | || || | || ||| | | |||||| Sbjct 47163 GAGGGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGT-AAAGTACTTGTTGGACATG 47105 Query 115241 TTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGC 115300 | | ||||||||| | |||| ||||| || ||||| ||||||| | || ||| Sbjct 47104 TAGTTGTAGGTCTCGATCGCGGCCTCGATGTCGTCGCCGTGGATACCGACAGCAACTCGC 47045 Query 115301 ATAAACATGTATTGGGGT 115318 || | ||||| || ||| Sbjct 47044 ATGATCATGTGCTGTGGT 47027 >seq157 Length=447866 Score = 118 bits (130), Expect = 1e-21 Identities = 295/444 (66%), Gaps = 12/444 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || || ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 174522 GTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 174463 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | ||| | | |||||| || | | | ||| Sbjct 174462 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTG----CCGAGTGCGAG-GAGC 174408 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 ||||| || | |||| |||||||||| | |||| | | |||||| |||| ||| Sbjct 174407 AGACGGTCGGCGACGAACTCAATGTATTGGCACATGAGGTTGGCGTTCATGCCGAGCAGG 174348 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || ||||| ||| |||| ||| ||| || ||| || || | |||| Sbjct 174347 GCACAAGGCAGAGCGTCGGAGAGGAACTCCTGCTCGATGGTCACAGCCTCGGTGATGATG 174288 Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAA 126051 || | | ||| | ||| || ||| | | | |||||| ||| || Sbjct 174287 CTCTGTACGAGGTCAGGCGAAGG-CTTGTGCTTGAGCTGTGAGAAGAGCAGGCAGGCGAA 174229 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || ||| | ||||||||||| ||||| || || || |||||| || || | ||| Sbjct 174228 GTCAGTGTGCATGCCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTAAGACCAGCCAT 174169 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||| || ||||||||||||||||| || | || || || ||||||||||| || || Sbjct 174168 GAGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGATGCCTTC 174109 Query 126172 CACACACGCGAACGCAAAGAGACG 126195 || || || |||| |||||| Sbjct 174108 GACGGCAGCAAAGGCAACGAGACG 174085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350359356720