Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq416 105 7e-18 >seq416 Length=196129 Score = 105 bits (116), Expect = 7e-18 Identities = 143/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || |||| |||| || ||||||||||||||||| Sbjct 78024 CTCCTTCTGGATGTTGTAGTCCGACAAGGTCCTGCCGTCCTCGAGCTGCTTACCAGCGAA 78083 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||| ||||| | ||| | | |||||||| | ||| | || | |||| || Sbjct 78084 GATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGT-CTTGAATCTTGGACTTGA-CG 78141 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | ||||| ||||| || |||| ||||| || ||||| || || ||||| Sbjct 78142 TTGTCGATGGTGTCCGATGATTCGACCTCGAGTGTGATAGTCTTGCCTGTGAGAGTCTTG 78201 Query 42195 ACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 78202 ACGAAGATTTGCAT 78215 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| ||| ||||| || |||| || || ||||| || || || Sbjct 78252 CTCCTTTTGGATGTTGTAGTCACTGAGAGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAA 78311 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 78312 GATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATT 78371 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || ||||| |||| ||||| || ||||| || || ||||| || Sbjct 78372 GTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCAC 78431 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 78432 GAAGATCTGCAT 78443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543209853070560