Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq416 98.7 1e-15 seq104 84.2 2e-11 >seq416 Length=196129 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| | | ||| || || || | ||| || || ||||| |||||||| || | Sbjct 78217 CCACCGCGAAGACGAAGGACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTG 78276 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || || |||||||||||| | || || ||||||||||| |||||| Sbjct 78277 AGAGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGA 78336 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| ||| || | || || | ||||| Sbjct 78337 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAAGACTCCACC 78396 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| || ||||| Sbjct 78397 TCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 >seq104 Length=125481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | || |||||| |||| || |||||||||||||| | || Sbjct 107679 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 107620 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 | ||||| ||||| || ||||| || || || || || || || ||| ||| || Sbjct 107619 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 107560 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 | || ||| || || || || | || | ||||||||| |||| || || ||||| Sbjct 107559 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 107501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642089426960