Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq127 217 1e-51 >seq127 Length=55032 Score = 217 bits (240), Expect = 1e-51 Identities = 601/916 (66%), Gaps = 4/916 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| || || ||| || || |||||| || || ||| Sbjct 46953 AACTACCAATACTTCGGCTTCAAGACGCTTGAGCGCTCATATCTCCTCCGCATCGACGGC 47012 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| ||||| |||| || || || | ||||| || || |||| || |||||| || Sbjct 47013 AAAGTTGCCGAGAGACCACAGCACATGATCATGCGAGTTGCTGTCGGTATCCACGGCGAC 47072 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||||| | | | | | | || ||||| ||||| | ||| |||| | Sbjct 47073 GACATCGAGGCCGCGATCGAGACCTACAACTACATGTCCAACAAGTACTTTACACATG-C 47131 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | |||| || || |||| ||| || ||||| | ||||| | | || || ||||| || Sbjct 47132 CTCCCCTACGCTCTTCAGCGCAGGTACCCCTCAGGCACAGCTTGCGTCCTGCTTCCTTAT 47191 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| ||| || || | ||||| ||||| ||| || | | Sbjct 47192 CGAC-ATGAAGGATGACAGCATTGAGGGTATCTACGACACTCTCAAAATCTGCGCCATGA 47250 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || |||| || || || || ||| ||| | | ||||||| ||| | | Sbjct 47251 TCTCCAAGAACGCTGGTGGTATTGGTCTCAACACTCACCGCATTCGTGCCACTGGTGCTT 47310 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| |||| ||||| || ||||||||||| ||||| || ||||| || || | ||||| Sbjct 47311 ACATTGGCGGCACCAACGGTACCTCCAACGGTCTCGTTCCCATGCTTCGTGTTTACAACA 47370 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || || ||||| ||||||||||| | | | ||| | || || |||| | Sbjct 47371 ACACCGCTCGTTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCTATCTACC 47430 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| |||||||| ||| | | ||| | ||||| || |||||||||||||| | Sbjct 47431 TCGAGCCATGGCACGCCGACATCATTCCCTTCCTGGACCTTCGCAAGAACCACGGCAAGG 47490 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | || | |||||||||||||| || ||| | || ||| | || ||||| | Sbjct 47491 AAGAAGTCCGTGCTCGTGACCTCTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGC 47550 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || || | ||| | ||||| ||| | || || | || || ||||| || ||| Sbjct 47551 GTGTGGAACAGAACGGCAACTGGACTCTGATGTGCCCTCACGAGTGCCCCGGTCTTGCCG 47610 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || | || | || || | |||| | ||||| ||||| | Sbjct 47611 ATGTCTACGGCGAGGAGTTCGAGGCGCTGTACGAGAAGTACGAGCGTGAGGGCCGTGGTC 47670 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | || ||| || |||| | ||| | ||| | || | ||||| ||||| | Sbjct 47671 GCGAGACTATCCGCGCACAGAAGGTCTGGTACGCCATCCTCGAGGCTCAGGTCGAGACCG 47730 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | | |||| ||| | | ||| || ||| |||| |||| ||||||| || |||| | Sbjct 47731 GCAACCCCTTCATGCTTTACAAAGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGG 47790 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | || ||||| || ||||||| ||||| ||||||| ||| | || || ||| Sbjct 47791 GCACCATTCGCAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAGG 47850 Query 94613 TTGCTGTGTGTAACCT 94628 | || ||||| ||||| Sbjct 47851 TCGCCGTGTGCAACCT 47866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720516126640