Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq416 145 2e-29 seq104 87.8 4e-12 >seq416 Length=196129 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| |||||||||||||| |||| ||||||||| | ||| ||| Sbjct 77995 CGAAGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTC 78054 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || || || || |||||||| || |||||||| || ||||| ||||| || || || Sbjct 78055 CTGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCC 78114 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| |||| |||||| | || ||| || || | Sbjct 78115 TCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGACCTCGAGT 78174 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || ||||| Sbjct 78175 GTGATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTG 78212 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| || ||||||||||||| |||||||||| | ||| Sbjct 78223 CGAAGACGAAGGACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTGAGAGTG 78282 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || ||||| ||||| ||||| |||||||||||||||||| ||| || Sbjct 78283 CGACCGTCCTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCC 78342 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| ||||| | | || || || | Sbjct 78343 TCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCGGAAGACTCCACCTCGAGG 78402 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || ||||| || || || Sbjct 78403 GTGATAGTCTTGCCAGTGAGGGTCTTCACGAAGATCTG 78440 >seq104 Length=125481 Score = 87.8 bits (96), Expect = 4e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | || || || |||||||| |||||||||| Sbjct 107681 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 107622 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||||| |||||||| ||| || || ||||| ||||| |||||| | Sbjct 107621 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 107562 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| ||||| || || || || | Sbjct 107561 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 107502 Query 199620 A 199620 | Sbjct 107501 A 107501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915044459078