Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq53 342 7e-89 seq24 140 4e-28 seq38 109 7e-19 >seq53 Length=33237 Score = 342 bits (378), Expect = 7e-89 Identities = 770/1151 (67%), Gaps = 12/1151 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 33107 TCACCGGAAAGGATAGCGGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 33048 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || | || || ||||| || | || || | | | || | || ||| Sbjct 33047 ATGGACTTGCAGGGCTCCTTGCCGTTGAAGAAGTCGGAGACGAGCTTCTGGACCTTGGGG 32988 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || || || |||||||| | | Sbjct 32987 ATACGAGTGGAACCACCGACAAGGACGATCTCGTGGACGGAGGACTTGTCGATCTTGGCG 32928 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| ||||| | |||| || || ||| Sbjct 32927 TCACGGAGAGTGCGCTCGACGGGCTCCATGGTGCCGCGGAAGAGGTCCTGGCAGAGCTCC 32868 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| ||||| || ||||| || | || ||| | | || || || Sbjct 32867 TCGAAGCGAGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCGATC 32808 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || || || | ||||| | || ||||| || ||||| || || || || Sbjct 32807 TCAATGGAGGTCTGAGCGGAAGAAGAAAGAGTGCGCTTCGCACGCTCGCAAGCAGTGCGG 32748 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| |||||||| | ||| || | || ||||| || ||||| || ||||| Sbjct 32747 AGACGACGGAGGGCACGAGCGTTGGCGCTGAGGTCCTTCTTGTGCTTACGCTTGAACTCG 32688 Query 7430 TCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 | |||||| | || ||| | | || || || |||||||| | ||| || || Sbjct 32687 TTGCTGAAGTGGTTGACAAGGCGGTTG---TCAAAGTCCTCACCACCAAGGTGAGTGTCA 32631 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || || || | ||||| || |||||||| | |||||| | | | || ||||| || Sbjct 32630 CCAGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTAAGGAGAGAGACATCGAAG 32571 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGA 7606 ||||||||||| || || || ||||| || ||| | || | || | ||||| || ||| Sbjct 32570 GTACCACCACCAAGATCGAAGATGAGGACATTCTTCTCACCCTCCTGCTTCTTGTCAAGA 32511 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| || ||||| || || || || || || || ||||| ||| ||| ||||||||| Sbjct 32510 CCGTAGGCAATAGCAGCGGCAGTGGGCTCGTTGATGATACGGAGAACGTTGAGGCCAGCA 32451 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 || | ||||| || || || || || || || ||||| ||||| || || || || Sbjct 32450 ATCAGACCGGCATCCTTGGTAGCCTGACGCTGAGAGTCGTTGAAGTATGCGGGAACGGTG 32391 Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 | ||| |||| | || | ||| || || || || || | || ||| ||||| Sbjct 32390 ATGACAGCGTTGTTAACGGTGCCACCAAGGTAAGACTCAGCAGTCTCGCGCATCTTGGTG 32331 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACT 7846 || | ||| ||||| ||||| || | | || | || ||||| || || || || Sbjct 32330 AGGATCATGGATGAGATCTCCTCGGGGGTGAAGTCCTTGACCTCACCCTTGAACTCGACC 32271 Query 7847 TCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCG 7906 | | | ||| || ||| || ||| ||||| | | | | ||||| ||| Sbjct 32270 TGGGTGACGGGCTT-GCCG--GCCTTCTCGATGACCTTGAAGGGGAAGTGCTTCATGTCG 32214 Query 7907 TCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966 | || |||| || ||||| | || || |||||||| || || || || ||| Sbjct 32213 GCCTGAACCTCAGCATCGTTGAACTTGCGGCCAATGAGACGCTTGGCGTCGAAGACGGTG 32154 Query 7967 TTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTT 8026 || | ||||||||||| |||||||| |||| ||| ||||| ||||| || | Sbjct 32153 TTGTGAGGGTTCATGGCGACCTGGTTCTTGGCCGAGTCACCGATCAGACGCTC---GGTG 32097 Query 8027 TCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCT 8086 || || || || ||| |||| || || || || || || |||||||| || || || || Sbjct 32096 TCGGTGAAGGCAACGAACGAGGGAGTGGTGCGGTTACCCTGGTCGTTGGCGATGATCTCA 32037 Query 8087 ACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATT 8146 | |||||| | | ||| || ||||| || || || || || | ||| || ||||| Sbjct 32036 ATGCGGTCATCACGGAAGATACCCACGCAAGAGTAGGTGGTACCAAGATCGATTCCGATA 31977 Query 8147 GCTTGAGTCAT 8157 || ||| ||| Sbjct 31976 GCGGGAGCCAT 31966 >seq24 Length=474551 Score = 140 bits (154), Expect = 4e-28 Identities = 249/363 (69%), Gaps = 3/363 (1%) Strand=Plus/Plus Query 7435 GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGT 7494 |||||| |||||| | | ||||| || | ||||| | ||| || || || ||||| Sbjct 122272 GAAGTGCTCAAGGAGGTTGGTGTCGAAGTCCTGGCCACCAAGGTGAGTGTCACCAGCGGT 122331 Query 7495 CGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACC 7554 || ||||| |||| ||| || | |||| | | || ||||| || || || || Sbjct 122332 AGCCTTGACGGTGAAGACACCGCCCTGGATGTGAAGGAGGGAGACATCGAAAGTTCCTCC 122391 Query 7555 ACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCTTATCGAGACCGTA 7611 ||| || || | ||||| ||||| || | ||| ||| | |||||||||| Sbjct 122392 ACCAAGATCGTAGATGAGGACGTTGCGCTCCTTGTCGGACTTGCCGGCACCGAGACCGTA 122451 Query 7612 CGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGT 7671 |||||||| || || || || || || || ||||| ||| ||| ||||||||||| | Sbjct 122452 GGCGATAGCGGCGGCGGTAGGCTCGTTGATGATACGGAGAACGTTGAGGCCAGCAATGGC 122511 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | || || || || || || | || ||||| |||||||| ||||| || | ||| Sbjct 122512 ACCAGCGTCCTTAGTGGCCTGCCTCTGGTTGTCGTTGAAGTAGGCGGGGACGGTGATGAC 122571 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 || | | ||| ||||| ||||| | | || ||||| || ||||| ||||| ||||| Sbjct 122572 GGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCAGCGATCTCCTTCATCTTGGTGAGAAC 122631 Query 7792 CAT 7794 ||| Sbjct 122632 CAT 122634 >seq38 Length=334149 Score = 109 bits (120), Expect = 7e-19 Identities = 240/356 (67%), Gaps = 9/356 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || | || || |||| ||| Sbjct 145548 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCGGCGGTAGCCTGAACCTCGAAGACACCC 145607 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA---AATGAGT 7573 |||| | || | || ||||| || ||||| ||||| || || | ||||| Sbjct 145608 TGGTCAACAGTCAAGATGGAGACATCGAAAGTACCTCCACCGAGATCGTAGACAATGATC 145667 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | ||| || | ||| | |||| ||||||||||| |||| ||| || || || || Sbjct 145668 TGG--CGT-TCCTGGTC---GGTCTTGTCGAGACCGTAGGCGAGAGCGGCGGCGGTGGGC 145721 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || |||| | ||| | | ||| || || || || || | ||||| || || || Sbjct 145722 TCGTTAACCACACGCATAACGTTAAGACCGGCGATGGTGCCGGCATCCTTGGTGGCGGCA 145781 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| |||||||| ||||| || ||||| |||| ||| |||| ||| Sbjct 145782 CGCTGAGCGTCGTTGAAGTAGGCGGGGACAGTGACGACGGCGTTGACGACCTTCTCGCCG 145841 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || ||| || |||| || ||||| ||| |||| ||| || || | ||| || Sbjct 145842 AGGTACTGCTCAGCGACCTCCTTCATCTTGCCGAGAATCATGGAAGAGACCTCCTC 145897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129354404560