Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq127 165 1e-35 seq157 111 2e-19 seq214 107 2e-18 >seq127 Length=55032 Score = 165 bits (182), Expect = 1e-35 Identities = 894/1402 (64%), Gaps = 49/1402 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || |||||||||| || || || || || | | Sbjct 47028 CCACAGCACATGATCATGCGAGTTGCTGTCGGTATCCACGGCGACGACATCGAGGCCGCG 47087 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || | |||||| ||| || | || || | || || ||||| Sbjct 47088 ATCGAGACCTACAACTACATGTCCAACAAGTACTTT-ACACATGCCTCCCCTACGCTCTT 47146 Query 111731 CAACGCTGGTACACCAAGACCCCAAAT---GTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787 || ||| ||||| || | || | |||| || |||||||| | | ||||| Sbjct 47147 CAGCGCAGGTACCCCTCAGGCACAGCTTGCGTCC---TGCTTCCTTATCGACATGAAGGA 47203 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAA--ATCTCAAAGTGG 111845 || || | || || |||| |||||||| ||| ||| | | ||||| ||| Sbjct 47204 TGACAGCATTGAGGGTATCTACGACACTCTCAA--AATCTGCGCCATGATCTCCAAGAAC 47261 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGG 111904 ||||||||||| || | ||| || | | |||| | || || ||| | || Sbjct 47262 GCTGGTGGTATTGGTCTCAACACTCACCGCATTCGTGCCA-CTGGTGCTTACATTGGCGG 47320 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 || || ||| || | ||| | |||| |||||||| || | ||| ||| || || Sbjct 47321 CACCAACGGTACCTCCAACGGTCTCGTTCCCATGCTTCGTGTTTACAACAACACCGCTCG 47380 Query 111965 CTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCC 112018 || || |||| | ||| ||| | | || | | || |||| || ||||| Sbjct 47381 TTACGTCGACCAGGGTGGCAACAAGCGCCCC---GGTGCCTTTGCTATCTACCTCGAGCC 47437 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 ||||||||| || ||||| ||||| || | || ||||| || | || || | Sbjct 47438 ATGGCACGCCGACATCATTCCCTTCCTGGACCTTCGCAAGAACCACGGCAAGGAAGAAG- 47496 Query 112079 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 | |||| || || ||||||| ||| || ||||| || || | ||||||||| | || | Sbjct 47497 TCCGTGCTCGTGACCTCTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGCGTGTGG 47556 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 | ||| ||||| ||| |||| | || || || || |||||||| |||||| | Sbjct 47557 AACAGAACGGCAACTGGACTCTGATGTGCCCTCACGAGTGCCCCGGTCTTGCCGATGTCT 47616 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA 112257 || |||||||| || || || ||| ||||||||| || | || | | || Sbjct 47617 ACGGCGAGGAGTTCGAGGCGCTGTACGAGAAGTACGAGCGTGAGGGCCGTGGTCGCGAGA 47676 Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | | | || | || ||| | || || ||| || |||| |||||| || | | Sbjct 47677 CTATCCGCGCACAGAAGGTCTGGTACGCCATCCTCGAGGCTCAGGTCGAGACCGGCAACC 47736 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | |||||||||||||| || |||| ||||| || || ||||| |||| | Sbjct 47737 CCTTCATGCTTTACAAAGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCA 47796 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 | || |||||| | || ||||| ||| | || | || | |||||| || | Sbjct 47797 TTCGCAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAGGTCGCCG 47856 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACATT 112495 |||| ||||| || || ||||||| |||| ||||| || || ||| || || Sbjct 47857 TGTGCAACCTTGCTTCTCTCGCTCTTCCCACCTATGTTGA--CATTCCCAACGAGCGCTT 47914 Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT-TA 112554 || | | || || ||||| || | ||||| || ||| | |||| ||| || Sbjct 47915 CGACTTCAAGAAGCTTCACGAGGTCGTCCAGGTCGTCACCAAGAACTTGAACA-AGTGTA 47973 Query 112555 TTGATAGAAATTTTTACCCCG---TTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 | || || ||||||| | ||| || || || || ||| ||||||||| Sbjct 47974 TCGAGGTCAACCACTACCCCGTCATCGAG---GCACGCAACAGCAACATGCGACACCGTC 48030 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT 112670 | || ||||||||||| |||||||| |||| ||| || || || || || || ||| Sbjct 48031 CTATCGGTCTCGGTGTGAGCGGTCTCGCTGATGCCTTCCTTGCTCTG-CG-CATGCCTTT 48088 Query 112671 -GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729 || || ||| || | |||| | || |||||||| || || ||||| || Sbjct 48089 CGAGTCGCCCGAGGCCCGCCAGCTCAACATCCAGATCTTTGAGACCATCTACCACGCTGC 48148 Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 ||| || || || | || ||| ||| | ||||| |||| | || || Sbjct 48149 CCTTACTGCTTCTTGCGATCTTGCTGAGAAGCTTGGAACGTATGAGACCTACGCTGGCTC 48208 Query 112790 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG---CTTC 112845 || || || |||||| | ||| || | || |||||| |||| |||| | || Sbjct 48209 CCCCGCCTC-CAAGGGTGAGCTCCAGTACGACATGTGG---GGTGTGACCCCGTCCGATC 48264 Query 112846 ACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 112905 | |||||||| || ||||||| | || ||| | |||||||| ||| ||| Sbjct 48265 TTTGGGACTGGGAGGCACTCAAGGCCAGGATTGCCGAGCACGGTCTTCGCAACTCCCTTC 48324 Query 112906 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 112965 | | || || ||||| || || ||| | || ||| |||| || || ||||| | Sbjct 48325 TCGTTGCTCCTATGCCTACTGCTAGCACTTCGCAGATCATGGGCTTCAACGAGTGCTTCG 48384 Query 112966 AACCCTACACGACGAACATCTA 112987 | || ||||| | |||||||| Sbjct 48385 AGCCGTACACCAGCAACATCTA 48406 >seq157 Length=447866 Score = 111 bits (122), Expect = 2e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242 || ||| | || ||||| || || || |||||||||||||| || ||| | |||| Sbjct 174085 CGTCTCGTTGCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCCTCTATC 174144 Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302 | ||| | |||||||| || |||||| | ||||| |||||||||||||||||||||| Sbjct 174145 TTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGCTTATCTCT 174204 Query 102303 CGTGACGAGGG 102313 ||||||||||| Sbjct 174205 CGTGACGAGGG 174215 >seq214 Length=46841 Score = 107 bits (118), Expect = 2e-18 Identities = 253/375 (67%), Gaps = 29/375 (8%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 |||||||||||||| || | | |||||| | ||| || ||||| ||||| || | Sbjct 5918 AAACCATCCATCTCGGTAAGGATCTGGTTCAAAGTGCTCTCGCGTTCGTCATT-GCCG-- 5862 Query 16035 ATACCACCAGCACTGCGTTG-----------CTTTCCCACGGCATCAATCTCATCAATGA 16083 ||||| || || |||| |||||| | ||||||||||| ||||||| Sbjct 5861 ---CCACC--CATTGAGTTGTTGCCTCTCTTCTTTCCAATAGCATCAATCTCGTCAATGA 5807 Query 16084 AGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCG- 16142 ||| ||| || || |||| | ||| | | |||||||| ||||| | ||| | Sbjct 5806 AGATGATACAAGGCGTGTTTTTTCTTGCGTTTGCGAAGAGATCGCGTACTC--TTGAAGG 5749 Query 16143 -CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACAT 16200 || ||||| || ||||||||||| || | | | || ||| | || ||| || || Sbjct 5748 ACCAACACCGACGAACATCTCCACGAACTCAGATCCAGAGACACT-GAAGAAAGGCACGC 5690 Query 16201 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 16260 |||||||| ||| | ||| ||||||||| |||||||| ||||| || ||| | Sbjct 5689 CGGATTCACCAGCAGTAGCTTTGGCGAGAAGGGTCTTACCAGTACCAGGAGGACCACTCA 5630 Query 16261 GGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTCCAAAGTATCTCTCAGGTTGCTTAAG 16318 ||| || || || || |||||||| || |||| | ||||| |||| | ||| || Sbjct 5629 GGACAGCGCCACGAGGGATCTTGGCTCCGAGCTTC--TGGAATCTCGCAGGCTCCTTGAG 5572 Query 16319 AAAATCCACAATCTC 16333 ||| |||| ||| Sbjct 5571 GAAAGAAACAAACTC 5557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739032472480