Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq127 174 2e-38 seq214 118 1e-21 seq157 91.5 2e-13 >seq127 Length=55032 Score = 174 bits (192), Expect = 2e-38 Identities = 573/877 (65%), Gaps = 23/877 (3%) Strand=Plus/Minus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||||| | ||||| |||| || || | ||||| || || |||||| | ||| Sbjct 47893 ACATAGGTGGGAAGAGCGAGAGAAGCAAGGTTGCACACGGCGACCTCATCAGGTGCAGTG 47834 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | || ||||| ||||||||||| || ||| || |||| ||||| ||||| Sbjct 47833 TACTCGATGATCTCTGTGCACAAGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTG 47774 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627 ||||| |||| ||||| ||||| |||||| |||| | || ||||| ||| | | Sbjct 47773 CTCTTGCGGTTGGCAGCATCTTTGTAAAGCATGAAGGGGTTGCCGGTCTCGACCTGAGCC 47714 Query 106628 TTGAGAATTGCCTTCCACA-CATCGGCG-GCTGGTACAATGGCGTTGGCCCGTCCCTCCG 106685 | ||| || || | ||| | | || | | || | || | ||| | || ||||| Sbjct 47713 TCGAGGATGGCGTACCAGACCTTCTGTGCGCGGATAGTCTCGCG--ACCACGGCCCTCAC 47656 Query 106686 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 106745 ||||||||| ||| || || || |||||||| || | |||| ||||| || Sbjct 47655 GCTCGTACTTCTCGTACAGCGCCTCGAACTCCTCGCCGTAGACATCGGCAAGACCGGGGC 47596 Query 106746 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGT 106805 || || || || | |||| ||| | || || || || ||||||||||| | || Sbjct 47595 ACTCGTGAGGGCACATCAGAGTCCAGTTGCCGTTCTGTTCCACACGCTTCATGAACAAGT 47536 Query 106806 CTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTG 106864 | || |||||||||| | ||||| || | | ||| || | ||||| | || ||||| Sbjct 47535 CGGGGATCCACAGGGCGTAGAAGAGGTCACGAGCACGGA-CTTCTTCCTTGCCGTGGTTC 47477 Query 106865 AGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATA 106924 || | || ||||| ||||| || |||||||||||||| || |||| || | Sbjct 47476 TTGCGAAGGTCCAGGAAGGGAATGATGTCGGCGTGCCATGGCTCGAGGTAGATAGCAAAG 47417 Query 106925 GATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCG 106980 | || | | | | ||| | || | || || || || ||| ||| | || || Sbjct 47416 GCACCGGGGCGCTTGTTG-CCACCCTGGTCGACGTAACGAGCGGTGTTGTTGTAAACACG 47358 Query 106981 AAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGC 107040 |||||| |||| | ||| | || ||| || || || | ||| || | |||| Sbjct 47357 AAGCATGGGAACGAGACCGTTGGAGGTACCGTTGGTGCCGCCAATGTAAGCACCAGTGGC 47298 Query 107041 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACAC 107098 | | || ||| | |||||||| ||||| ||| ||||| | ||||| | Sbjct 47297 ACGAATGCGGTGAGTGTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGCGCAGAT 47238 Query 107099 TCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAA 107158 | | ||||| | |||||||| | || ||| ||||| || ||||||||||||| Sbjct 47237 T--TTGAGAGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATAAGGAAGCA- 47181 Query 107159 CTGGAC---ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATG 107215 |||| | ||| | || ||||| || ||||||| || || | || || | Sbjct 47180 --GGACGCAAGCTGTGCCTGAGGGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGT- 47124 Query 107216 AACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTG 107274 || ||| | | |||||| | || ||| ||||| | | | || ||||| || ||||| Sbjct 47123 AAAGTACTTGTTGGACATGTAGTTGTAGGTCTCGATCGCGGCCTCGATGTCGTCGCCGTG 47064 Query 107275 GATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311 ||| |||| || || ||||| | ||||| || ||| Sbjct 47063 GATACCGACAGCAACTCGCATGATCATGTGCTGTGGT 47027 >seq214 Length=46841 Score = 118 bits (130), Expect = 1e-21 Identities = 253/373 (68%), Gaps = 25/373 (7%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 |||||||||||||| || | | ||||| | ||| || ||||| ||||| || | Sbjct 5918 AAACCATCCATCTCGGTAAGGATCTGGTTCAAAGTGCTCTCGCGTTCGTCATT-GCCG-- 5862 Query 9342 ATACCACCAGCACTGCGTTG-----------CTTTCCCACGGCATCAATCTCATCAATGA 9390 ||||| || || |||| |||||| | ||||||||||| ||||||| Sbjct 5861 ---CCACC--CATTGAGTTGTTGCCTCTCTTCTTTCCAATAGCATCAATCTCGTCAATGA 5807 Query 9391 AGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGC 9450 ||| ||||| || |||| | ||| || | ||||||||||| || ||| | | Sbjct 5806 AGATGATACAAGGCGTGTTTTTTCTTGCGTTTGCGAAGAGATCGCGTACTCTTGAAGGAC 5747 Query 9451 CCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACATTA 9509 | ||||| || ||||||||||| || | | | || ||| | || ||| || || Sbjct 5746 CAACACCGACGAACATCTCCACGAACTCAGATCCAGAGACACT-GAAGAAAGGCACGCCG 5688 Query 9510 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9569 |||||||| ||| | ||| ||||||||| |||||||| ||||| || ||| ||| Sbjct 5687 GATTCACCAGCAGTAGCTTTGGCGAGAAGGGTCTTACCAGTACCAGGAGGACCACTCAGG 5628 Query 9570 AGGGCACCCCGTGGAATCTTGGCGCC--ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAA 9627 | || || || || |||||||| || |||| | ||||| |||| | |||||| | Sbjct 5627 ACAGCGCCACGAGGGATCTTGGCTCCGAGCTTC--TGGAATCTCGCAGGCTCCTTGAGGA 5570 Query 9628 AATCCACAATCTC 9640 || |||| ||| Sbjct 5569 AAGAAACAAACTC 5557 >seq157 Length=447866 Score = 91.5 bits (100), Expect = 2e-13 Identities = 295/453 (65%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || || || |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 174521 TACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 174462 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA-AATGGGTGGCACCCCAACTTGTTTGAGGAG--- 117101 ||||| || || || | ||||| | || | | || | || |||||| Sbjct 174461 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA----GTGCGAGGAGCAG 174406 Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT 117161 ||| || | || |||||||||| | | |||| | | |||||| |||| || Sbjct 174405 ACGGTCGGCGACGAACTCAATGTATTGGCACATGAGGTTGGCGTTCATGCCGAGCAGGGC 174346 Query 117162 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 117221 ||| || || ||||| ||| |||| | | ||| || || ||||| | | |||| Sbjct 174345 ACAAGGCAGAGCGTCGGAGAGGAACTCCTGCTCGATGGTCACAGCCTCGGTGATGATGCT 174286 Query 117222 GTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACT 117280 || | || | | || || | | | | | ||||||| ||| || | Sbjct 174285 CTGTACGAGGTCAGGCGAAGG-CTTGTGCTTGAGCTGTGAGAAGAGCAGGCAGGCGAAGT 174227 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||| | ||||| || || || ||||| || || |||||| || || | ||||| Sbjct 174226 CAGTGTGCATGCCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTAAGACCAGCCATGA 174167 Query 117341 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 117400 | || |||||||||||||| | |||| | ||| || || ||||||||||| || || | Sbjct 174166 GGCCACGCTTCTTCAACCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGATGCCTTCGA 174107 Query 117401 CACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 | ||||| |||| || || |||||||| Sbjct 174106 CGGCAGCAAAGGCAACGAGACGGCAGGCGAAGG 174074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977599354160