Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq416 168 1e-36 seq104 102 2e-16 >seq416 Length=196129 Score = 168 bits (186), Expect = 1e-36 Identities = 165/210 (79%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAGTTCTCCCATCTTC 194990 || ||||||||||| ||||| || || || ||||| | || |||| || || || || || Sbjct 78007 ACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAG-GTCCTGCCGTCCTC 78065 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||||||| ||||||||||| || ||||||||||| || || || || |||||||| Sbjct 78066 GAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCTTG 78125 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| || ||||||||||| ||| || || || || | ||||| Sbjct 78126 AATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGACCTCGAGTGTGATAGTCTT 78185 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||| || ||||| | |||||| Sbjct 78186 GCCTGTGAGAGTCTTGACGAAGATTTGCAT 78215 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || ||||| ||||| ||| | ||| | ||||| || Sbjct 78463 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCCTCA 78522 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || || || ||||||||||| || ||||| || Sbjct 78523 AGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGG 78582 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||||||| || || || ||||| | |||||| Sbjct 78583 ATCTTGCTCTTCACGTTGTCGATAGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTT 78642 Query 195112 CCTGT 195116 || || Sbjct 78643 CCCGT 78647 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| ||||| || ||||| || ||||| | || || ||| Sbjct 78235 ACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTGAGAGTGCGACCGTCCTCG 78294 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || || || ||||| ||||||||||| || ||||| || Sbjct 78295 AGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 78354 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| ||| ||||| || ||||| | ||||| Sbjct 78355 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTG 78414 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 78415 CCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 >seq104 Length=125481 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| || || | || || ||||||||||| || |||||||| Sbjct 107679 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 107620 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || |||||||| || |||||||| || ||||| || || || ||| || || || Sbjct 107619 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 107560 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||||||| || || || || ||||| | ||||| || |||| || || ||||| Sbjct 107559 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 107501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109475430588878