Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq127 269 5e-67 seq157 253 4e-62 >seq127 Length=55032 Score = 269 bits (298), Expect = 5e-67 Identities = 1011/1570 (64%), Gaps = 59/1570 (4%) Strand=Plus/Minus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCAC-TTGACCAGGTGAGGGTTGACTA 212916 ||||| ||| |||| ||||| | |||| || | | |||| || ||||||||| | Sbjct 48497 CATGTTGTCGCTCCACAGGCCGC-GGTCGACAAGATCCTTGAGCAACCAAGGGTTGACAA 48439 Query 212917 TCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGC 212976 |||||| || || | || || | | ||| | ||| ||||| ||||||| || Sbjct 48438 CCTGGAACTCGCCGGCAAGAACACGACGGGAGTAGATGTTGCTGGTGTACGGCTCGAAGC 48379 Query 212977 TCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGAC 213036 ||||||| |||| ||||| | |||||| || || ||||| ||||| || || || Sbjct 48378 ACTCGTTGAAGCCCATGATCTGCGAAGTGCTAGCAGTAGGCATAGGAGCAACGAGAAGGG 48319 Query 213037 TGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAG 213096 ||| | | ||||||||| | || | | || | |||||||||| | | Sbjct 48318 AGTTGCGAAGACCGTGCTCGGCAATCCTGGCCTTGAGTGCCTCCCAGTCCCAAAGATCGG 48259 Query 213097 ACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGC 213156 || || |||| ||||||||| |||| | || ||| ||||| Sbjct 48258 ACGGGG---------TCACACCCCACATGTCGTACTGGAGCTCACCCTTGGAGGCGGGGG 48208 Query 213157 TGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGG 213216 ||| ||| | || | ||| ||| || || || ||||| || || |||| Sbjct 48207 AGCCAGCGTAGGTCTCATACGTTCCAAGCTTCTCAGCAAGATCGCAAGAAGCAGTAAGGG 48148 Query 213217 CAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGA 213276 |||||| ||||||||| ||||| |||| ||||||||| |||||| || ||| || Sbjct 48147 CAGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGGCGGGCCTCGGGCGACTCGA 48088 Query 213277 AGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTC 213336 | ||||| || |||| ||||||| || || || |||| ||||| || | Sbjct 48087 AAGGCATGCGCAGAGCAAGGAAGGCATCAGCGAGACCGCTCACACCGAGACCGATAGGAC 48028 Query 213337 TGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATC 213395 ||||| || ||| ||| | || ||| | |||||| |||| ||||| | Sbjct 48027 GGTGTCGCATGTTGCTGTTGCGTGC-CTCGATGACGGGGTAGTGGTTGACCTCGATACAC 47969 Query 213396 TTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACG 213455 ||||| | ||| |||| | || | | ||| | | || | || |||| || Sbjct 47968 TTGTTCAAGTTCTTGGTGACGACCTGGACGACCTCGTGAAGCTTCT------TGAAGTCG 47915 Query 213456 TAGCCCCCGTCCTGCACA--AACTCAGGCAGG----GCGATGCTGGCCAGGTTGCAAACG 213509 ||| | ||| | | ||| ||| || |||| || |||||||| ||| Sbjct 47914 AAGCGCTCGTTGGGAATGTCAACATAGGTGGGAAGAGCGAGAGAAGCAAGGTTGCACACG 47855 Query 213510 GCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATG 213569 || ||||| | || | |||||||| |||||||| ||||||| |||| || || ||| Sbjct 47854 GCGACCTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTGCGAATG 47795 Query 213570 GTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGG 213629 ||||||||||||| ||||| ||| |||||||| ||| ||||| |||||| ||||| Sbjct 47794 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCTTTGTAAAGCATGAAGGGG 47735 Query 213630 GACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACC 213689 |||||||| | ||| | | | || || ||| ||||| | |||| | Sbjct 47734 TTGCCGGTCTCGACCTGAGCCTCGAGGAT--GGC-------GTACCAGACCTTCTGTGCG 47684 Query 213690 CGCCTGACAG-CTC-------CGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAAT 213740 || || || ||| ||| | | | |||||||| ||||| ||| | | ||| Sbjct 47683 CG---GATAGTCTCGCGACCACGGCCCTCACGCTCGTACTTCTCGTACAGCGCCTCGAAC 47627 Query 213741 TCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGA-TGCGGGACACATGAGGCTCCAGTC 213799 || | ||| |||| | | || || || || || ||| ||||| || |||||| Sbjct 47626 TCCTCGCCGTAGACATCGGCAAGACCGGGGCACTCGTGAGGG-CACATCAGAGTCCAGTT 47568 Query 213800 CCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC 213859 |||| | | || | || |||||||| ||| |||| |||||| ||| ||| ||||| Sbjct 47567 GCCGTTCTGTTCCACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAAGAGGTC 47508 Query 213860 CCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTC 213919 | | | || ||| || ||| ||||| || || || ||| || |||||| Sbjct 47507 ACGAGCACGGACTTCTTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAAGGGAATGATGTC 47448 Query 213920 CGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTC 213976 |||||||| ||||| | |||||| |||||||| || || | |||| || |||||||| Sbjct 47447 GGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 47388 Query 213977 CACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCC 214036 || | || ||||| | | || || | ||| || || |||||||| || Sbjct 47387 GACGTAACGAGCGGTGTTGTTGTAAACACGAAGCATGGGAACGAGACCGTTGGAGGTACC 47328 Query 214037 GTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCC 214096 |||||| || | || || | || | ||| | | | | || ||| || || || Sbjct 47327 GTTGGTGCCGCCAATGTAAGCACCAGTGGCACGAATGCGGTGAGTGTTGAGACCAATACC 47268 Query 214097 ACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCT 214156 ||| |||| ||||||||||||||||||| | | ||| || ||| || | ||||| Sbjct 47267 ACCAGCGTTCTTGGAGATCATGGCGCAGATTTTGAGAGTGTCGTAGATACCCTCAATGCT 47208 Query 214157 GTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGT 214215 |||||| | | || | | ||||||| || |||| | ||||| | | || | | Sbjct 47207 GTCATCCTTCATGTCGATAAGGAAGCAGGACGCAAGCT-GTGCCTGAGGGGTACCTGCGC 47149 Query 214216 TGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCA 214275 |||| ||||| ||| |||||| | | ||||||| || | | |||||||||| | Sbjct 47148 TGAAGAGCGTAGGGGAGGCATGTGTAAAGTACTTGTTGGACATGTAGTTGTAGGTCTCGA 47089 Query 214276 GGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGG 214335 | | |||||||| |||||| | ||| | ||| | ||||||||| | Sbjct 47088 TCGCGGCCTCGATGTCGTCGCCGTGGATACCGACAGCAACTCGCATGATCATGTGCTGTG 47029 Query 214336 GCCTCTCTATGGGTCCTTTGGGGCCCTT---GAGCAGGTAGGAGCGCTCCAGAGTCTTGA 214392 | ||||| || ||||| | | | ||| || || |||||||| || ||||||| Sbjct 47028 GTCTCTC---GGCAACTTTGCCGTCGATGCGGAGGAGATATGAGCGCTCAAGCGTCTTGA 46972 Query 214393 ACCCAAAGTA 214402 | || ||||| Sbjct 46971 AGCCGAAGTA 46962 >seq157 Length=447866 Score = 253 bits (280), Expect = 4e-62 Identities = 569/846 (67%), Gaps = 18/846 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 174525 CTGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 174466 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | | ||| ||| | || | || Sbjct 174465 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCGAGG 174411 Query 47957 AGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || || || |||||| |||| ||||||| |||||||| || ||||||||| | Sbjct 174410 AGCAGACGGTCGGCGACGAACTCAATGTATTGGCACATGAGGTTGGCGTTCATGCCGAGC 174351 Query 48014 AGGGACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 |||| ||| |||| ||| | | ||| ||||||| ||| || ||| || || | Sbjct 174350 AGGG-CACAAGGCAGAGCGTCGGAGAGGAACTCCTGCTCGATGGTCACAGCCTCGGTGAT 174292 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 || || ||| || || || |||| || | ||| | |||||| ||| Sbjct 174291 GATGCTCTGTACGAGGTCAGGCGAAGGCTTGT---GCTTGAGCTGTGAGAAGAGCAGGCA 174235 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||| ||||| |||||| ||| ||||| || ||| ||| ||||||||||| ||||| Sbjct 174234 GGCGAAGTCAGTGTGCATGCCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTAAGACC 174175 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 || ||||| || | || || | |||||| || | ||||| ||||||||||||||||| Sbjct 174174 AGCCATGAGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGAT 174115 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 ||| || || || || || || ||| | |||| | | |||| ||| ||| Sbjct 174114 GCCTTCGACGGCAGCAAAGGCAACGAGACGGCAGGCGAAGGTGGACTTCTCGTCGCTGAT 174055 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 ||| || |||||||| |||||||| |||||| || || | || ||||| ||| Sbjct 174054 CCATCGCAGAGCCCAGTCAGCCTTCTTACGGATGCAGGGAATGTTGTCGATGGCGTTGAA 173995 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432 ||| | || || || | |||| | ||||| || || | ||| |||| Sbjct 173994 GAGGTACTGGCGCTGGCGGACGTCGCTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTC 173935 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 ||||| | ||||| || ||||||||| ||||||||| | |||||| | ||| Sbjct 173934 GGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGGATCTG 173875 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 ||| || | | ||| | ||| | || ||||| ||||| || || || || || || || Sbjct 173874 CACCTCGGAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTCAGAGGCGGCGAA 173815 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTCCAGCC 48609 |||||| || || ||| || ||| ||||| | || | ||||| || |||||| | Sbjct 173814 GAAGGCGAGCACGTGTGAAATGAAGAAACGCTCATCGTCGTTGAGACGCTTGTTCCAGTC 173755 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTT 48669 || | || ||| || || | || || | ||||||||||| || || || || Sbjct 173754 GTGAAGATCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAGGAAGCCTCGGCCTTCTT 173695 Query 48670 GTACAT 48675 |||||| Sbjct 173694 GTACAT 173689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527746434560