Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq127 147 3e-30 seq214 122 1e-22 seq157 91.5 2e-13 >seq127 Length=55032 Score = 147 bits (162), Expect = 3e-30 Identities = 563/874 (64%), Gaps = 19/874 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| || || |||| |||||||| || ||||| || | | Sbjct 47028 CCACAGCACATGATCATGCGAGTTGCTGTCGGTATCCACGGCGACGACATCGAGGCCGCG 47087 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||||| | | ||| || | || || | || || ||||| Sbjct 47088 ATCGAGACCTACAACTACATGTCCAACAAGTACTTT-ACACATGCCTCCCCTACGCTCTT 47146 Query 75331 CAATGCTGGTACACCAAGACCGCAGAT---GTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387 || || ||||| || | ||| | |||| ||||||||||||| || ||||| Sbjct 47147 CAGCGCAGGTACCCCTCAGGCACAGCTTGCGTCC---TGCTTCCTTATCGACATGAAGGA 47203 Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGG 75445 ||| || | |||||||| | ||||| | | | ||||| | ||||| ||| Sbjct 47204 TGACAGCATTGAGGGTATCTACGACACTCT--CAAAATCTGCGCCATGATCTCCAAGAAC 47261 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||||| |||||||| | ||| || | | |||| | || ||| | || Sbjct 47262 GCTGGTGGTATTGGTCTCAACACTCACCGCATTCGTGCCACTGGTGCTTACATTGGCGGC 47321 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| || | ||| | |||| |||||||| || | ||| ||| || || Sbjct 47322 ACCAACGGTACCTCCAACGGTCTCGTTCCCATGCTTCGTGTTTACAACAACACCGCTCGT 47381 Query 75566 TATGTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621 || || | | || | ||| ||| || || | || ||||| | || ||||| Sbjct 47382 TACGTCGA-CCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCTATCTACCTCGAGCCATG 47440 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| ||||| ||||| ||||| || | || ||||| || | ||||| | || Sbjct 47441 GCACGCCGACATCATTCCCTTCCTGGACCTTCGCAAGAACCACGGCAAGGAAGAAG-TCC 47499 Query 75682 GTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 ||| | | || ||||| | |||||||||| || ||| | ||||||||||| || || Sbjct 47500 GTGCTCGTGACCTCTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGCGTGTGGAAC 47559 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || || | ||| |||| | || || || || || ||||| |||| | | Sbjct 47560 AGAACGGCAACTGGACTCTGATGTGCCCTCACGAGTGCCCCGGTCTTGCCGATGTCTACG 47619 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 | |||||||| || || || ||| ||||| || ||||| | | | |||| Sbjct 47620 GCGAGGAGTTCGAGGCGCTGTACGAGAAGTACGAGCGTGAGGGCCGTGGTCGCGAGACTA 47679 Query 75861 TACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | | || | || ||| | || || ||| | | ||| ||||| || | || | Sbjct 47680 TCCGCGCACAGAAGGTCTGGTACGCCATCCTCGAGGCTCAGGTCGAGACCGGCAACCCCT 47739 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||||||||||| |||||| ||| ||||| ||||| ||||| |||| || || Sbjct 47740 TCATGCTTTACAAAGATGCTGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTC 47799 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 ||||| || | ||||| || || | |||||||| | |||||| || || | Sbjct 47800 GCAGCTCCAACTTGTGCACAGAGATCATCGAGTACACTGCACCTGATGAGGTCGCCGTGT 47859 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 |||| | || || |||| ||||| | ||||| Sbjct 47860 GCAACCTTGCTTCTCTCGCTCTTCCCACCTATGT 47893 >seq214 Length=46841 Score = 122 bits (134), Expect = 1e-22 Identities = 220/317 (69%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 175186 TTCAGTGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTT 175245 ||||| || |||| || || |||| || || | || || ||| |||| ||| Sbjct 5512 TTCAGCGACGTTGCTGGCATGGACGAGGCGAAGGTGGAGATTATGGAGTTTGTTTCTTTC 5571 Query 175246 CTCAAGCAACCCGAGAGATATTTTGGAAGT--GGTGCCAAGATCCCCCGAGGCGCCCTTC 175303 |||||| | || | ||||| | |||| || ||||||||||| || ||||| | | Sbjct 5572 CTCAAGGAGCCTGCGAGAT--TCCAGAAGCTCGGAGCCAAGATCCCTCGTGGCGCTGTCC 5629 Query 175304 TCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAA 175363 | ||| || ||||| || |||||||| |||||| ||| | || |||||||| Sbjct 5630 TGAGTGGTCCTCCTGGTACTGGTAAGACCCTTCTCGCCAAAGCTACTGCTGGTGAATCCG 5689 Query 175364 ATGTCCCATTCATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGT 175422 || || ||| | ||||| ||||| | | || ||||||||||| || ||||| ||| Sbjct 5690 GCGTGCCTTTC-TTCAGTGTCTCTGGATCTGAGTTCGTGGAGATGTTCGTCGGTGTTGGT 5748 Query 175423 GCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTC 175482 | ||| || ||||||||||| | || ||| | |||| || ||||| ||||| Sbjct 5749 CCTTCAAGAGTACGCGATCTCTTCGCAAACGCAAGAAAAAACACGCCTTGTATCATCTTC 5808 Query 175483 ATTGATGAGATTGATGC 175499 ||||| ||||||||||| Sbjct 5809 ATTGACGAGATTGATGC 5825 >seq157 Length=447866 Score = 91.5 bits (100), Expect = 2e-13 Identities = 295/453 (65%), Gaps = 10/453 (2%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||||||| || || |||| ||||| || || || ||||||||||| || || | Sbjct 174074 CCTTCGCCTGCCGTCTCGTTGCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCTCGT 174133 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | |||| | |||||||||||||| || |||||| | || || |||||| || | Sbjct 174134 TCGCCTCTATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACG 174193 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTC-AAGACT 65247 | ||||| || || || ||||| | ||| || || ||| ||||||| | | Sbjct 174194 AGCTTATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTGCTCTTCTCACAGC 174253 Query 65248 TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307 | | | || || | | || | || |||| | | ||||| || || Sbjct 174254 TCAAGCACAAG-CCTTCGCCTGACCTCGTACAGAGCATCATCACCGAGGCTGTGACCATC 174312 Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367 ||| | | |||| ||| ||||| || || ||| || |||| |||||| | | Sbjct 174313 GAGCAGGAGTTCCTCTCCGACGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAACCTC 174372 Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGT---CTCCTCAAACAAGTTGGGGTGCCA 65424 |||| | | |||||||||| || | || ||| |||||| || | || | | Sbjct 174373 ATGTGCCAATACATTGAGTTCGTCGCCGACCGTCTGCTCCTCGCAC----TCGGCAACAA 174428 Query 65425 CCCATT-TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483 || | ||||| | || || || ||||| ||||| ||||| ||||| || || Sbjct 174429 GAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAA 174488 Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||||||| |||||||| || || || || Sbjct 174489 GACCAACTTCTTCGAGAAGCGTGTCGGCGAGTA 174521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566363609920