Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq53 389 5e-103 seq416 181 1e-40 seq214 140 4e-28 seq104 118 1e-21 seq24 95.1 2e-14 >seq53 Length=33237 Score = 389 bits (430), Expect = 5e-103 Identities = 831/1237 (67%), Gaps = 16/1237 (1%) Strand=Plus/Plus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| ||| ||||| || |||||| | || || || ||||| || || ||| | | | Sbjct 31966 ATGGCTCCCGCTATCGGAATCGATCTTGGTACCACCTACTCTTGCGTGGGTATCTTCCGT 32025 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 |||| || | ||||| ||| | || ||||| || ||||| || ||||| |||| |||| Sbjct 32026 GATGACCGCATTGAGATCATCGCCAACGACCAGGGTAACCGCACCACTCCCTCGTTCGTT 32085 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| || || | || ||||| | || || | || || || ||| || |||||| Sbjct 32086 GCCTTCACCGACACCGAGCGTCTGATCGGTGACTCGGCCAAGAACCAGGTCGCCATGAAC 32145 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 ||| ||| || ||||| ||||| |||||||| ||||| |||||||| ||| | Sbjct 32146 CCTCACAACACCGTCTTCGACGCCAAGCGTCTCATTGGCCGCAAGTTCAACGATGCTGAG 32205 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 || || | ||| || ||| ||| | | | ||| | || | | || | ||||| Sbjct 32206 GTTCAGGCCGACATGAAGCACTTCCCCT-TCAAGGTCATCGAGAAG--GCCGGCAAGCCC 32262 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | | | || || || | |||||| || | || | ||||| || || || || Sbjct 32263 GTCACCCAGGTCGAGTTCAAGGGTGAGGTCAAGGACTTCACCCCCGAGGAGATCTCATCC 32322 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||| | | | |||||| |||||||| || |||| | | ||| || || || | Sbjct 32323 ATGATCCTCACCAAGATGCGCGAGACTGCTGAGTCTTACCTTGGTGGCACCGTTAACAAC 32382 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || | || || || || ||||||| || || || || ||||| || ||||| || Sbjct 32383 GCTGTCATCACCGTTCCCGCATACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCC 32442 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | ||||| || || ||| ||| | || ||||| || || || || ||||| ||| Sbjct 32443 GGTCTGATTGCTGGCCTCAACGTTCTCCGTATCATCAACGAGCCCACTGCCGCTGCTATT 32502 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| |||||||| |||| | || || ||||| | ||||| ||||| ||| Sbjct 32503 GCCTACGGTCTTGACAAGAAGCAGGAGGGTGAGAAGAATGTCCTCATCTTCGATCTTGGT 32562 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || |||||||| || || | ||||| | ||||| ||||| || ||| || Sbjct 32563 GGTGGTACCTTCGATGTCTCTCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCT 32622 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTG 196009 ||||||||||| ||||| || |||||||| || || || || ||| || || || Sbjct 32623 ACTGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGACAACCGCCTTGTCAACCACTTC 32682 Query 196010 TCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | |||||| || ||| | ||||| || | | || || | || || ||| Sbjct 32683 AGCAACGAGTTCAAGCGTAAGCACAAGAAGGACCTCAGCGCCAACGCTCGTGCCCTCCGT 32742 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATG 196129 || || | ||||| || || ||||| || || ||||| |||||| | ||||| || Sbjct 32743 CGTCTCCGCACTGCTTGCGAGCGTGCGAAGCGCACTCTTTCTTCTTCCGCTCAGACCTCC 32802 Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGT 196189 ||||||| || || | || || || || |||||||| || | || |||||||| || Sbjct 32803 ATTGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGC 32862 Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 || || ||| | | || | || | ||||| || || || | || Sbjct 32863 TTCGAGGAGCTCTGCCAGGACCTCTTCCGCGGCACCATGGAGCCCGTCGAGCGCACTCTC 32922 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 |||||||| ||||| || ||||| || | || || |||||||| || || || || Sbjct 32923 CGTGACGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTTGTCGGTGGTTCCACT 32982 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || ||| | || || | | || ||||||||| || || ||| Sbjct 32983 CGTATCCCCAAGGTCCAGAAGCTCGTCTCCGACTTCTTCAACGGCAAGGAGCCCTGCAAG 33042 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | |||||||| ||||| || ||||| || ||||| ||||| ||||| ||||| || || Sbjct 33043 TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTTTCC 33102 Query 196430 GGTGTTGACAAT--AATAACGTCCA------AGATCTTCTGCTACTTGATGTTGCACCCG 196481 || ||||| | | ||||| ||||| || || || ||||| || || Sbjct 33103 GG---TGACACTTCCTCCAAGTCCACCAACGAGATC--CTCCTTCTCGATGTCGCGCCTC 33157 Query 196482 TATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGAC 196518 | ||||| ||| |||| || || |||||||| ||||| Sbjct 33158 TTTCCCTCGGTATTGAGACCGCTGGTGGTGTCATGAC 33194 >seq416 Length=196129 Score = 181 bits (200), Expect = 1e-40 Identities = 184/239 (77%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| ||||| ||||| ||||| || ||||||||||||||||| |||| Sbjct 78448 GTGGTATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGT 78389 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || | || |||||| || || ||||| |||||||| || | Sbjct 78388 CTTCCGACACTATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGG 78329 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || ||||| || || || || || || || || || ||| ||| | Sbjct 78328 ACCAGCAGCGTCTGATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACTCTCAGTGACT 78269 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 ||||| | ||||||||||| || || ||||| || || | ||||| ||||| ||||| Sbjct 78268 ACAACATCCAAAAGGAGTCCACGCTCCACCTCGTCCTTCGTCTTCGCGGTGGCATGCAA 78210 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || || || || || |||||||| |||||||| || || || Sbjct 78215 ATGCAAATCTTCGTCAAGACTCTCACAGGCAAGACTATCACACTCGAGGTCGAATCATCG 78156 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| ||||||||||||| ||||| || || ||||| || || Sbjct 78155 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACCAA 78096 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| || |||||||| ||||| || || || | ||| | | || |||||| Sbjct 78095 CAGCGCCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCAGGACCTTGTCGGACTACAAC 78036 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| ||||| ||||| || || | ||||| ||||| Sbjct 78035 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTCCGTCTTCGCGGTGG 77989 Score = 165 bits (182), Expect = 1e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 171884 TTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAG 171943 |||| ||||| || |||||||||||||||||||| || ||||| ||||| ||| | || Sbjct 78649 TTACGGGAAAGACCATCACCCTCGAGGTTGAGTCTTCGGACACTATCGACAACGTGAAGA 78590 Query 171944 CCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTA 172003 |||||| || || ||||| |||||||| || |||||||| || || || ||||| || | Sbjct 78589 GCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCGGGCA 78530 Query 172004 AACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTAC 172063 | |||||||| ||||| || || | || |||||| |||| |||||||| || || | Sbjct 78529 AGCAGCTTGAGGATGGTCGCACTTTGAGCGACTACAACATTCAGAAGGAGTCCACCCTCC 78470 Query 172064 ACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| || || | ||||| |||||| Sbjct 78469 ACCTCGTCCTCCGCCTTCGTGGTGGT 78444 >seq214 Length=46841 Score = 140 bits (154), Expect = 4e-28 Identities = 223/313 (71%), Gaps = 13/313 (4%) Strand=Plus/Plus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 ||||| ||||| ||| | || ||| | || ||||||||||| |||||||| || Sbjct 5611 ATCCCTCGTGGCGCTGTCCTGAGTGGTCCTCCTGGTACTGGTAAGACCCTTCTCGCCAAA 5670 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTG-CTCCGCGGC-GAGTTTCATCG 198666 |||| || |||||||| | || || ||||||||||| ||| | | ||||| | | | Sbjct 5671 GCTACTGCTGGTGAATCCGGCGTGCC-TTTCTTCAGTGTCTCTGGATCTGAGTT-CGTGG 5728 Query 198667 AGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAA 198726 |||||||||| ||||||||| || | || || || ||||| | | ||| | ||| Sbjct 5729 AGATGTTCGTCGGTGTTGGTCCTTCAAGAGTACGCGATCTCTTCGCAAACGCAAGAAAAA 5788 Query 198727 ATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAA 198786 | || ||||||||||||||||| |||||||| ||| |||| |||||| | | | || Sbjct 5789 ACACGCCTTGTATCATCTTCATTGACGAGATTGATGCTATTGGAAAGAAGAGAG--GCAA 5846 Query 198787 CTACTACACCTGGT------AATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTG 198840 | ||| || ||| ||||| || || ||| || | |||||| | || || | Sbjct 5847 CAACT-CAATGGGTGGCGGCAATGACGAACGCGAGAGCACTTTGAACCAGATCCTTACCG 5905 Query 198841 AGATGGATGGTTT 198853 ||||||||||||| Sbjct 5906 AGATGGATGGTTT 5918 >seq104 Length=125481 Score = 118 bits (130), Expect = 1e-21 Identities = 141/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 171863 TGCAA-ATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| | ||| || || ||||| || || || || |||||||||||||| ||||| || Sbjct 107492 TGCAACAGCTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 107551 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||| || || ||||| |||||||| || || || Sbjct 107552 GACACCATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 107611 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || || || || || ||||| || || || || |||||| | || |||||| Sbjct 107612 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 107671 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 107672 ATCCAGAAGG 107681 >seq24 Length=474551 Score = 95.1 bits (104), Expect = 2e-14 Identities = 238/361 (66%), Gaps = 3/361 (1%) Strand=Plus/Minus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 ||||| | ||| | || | ||||| | | ||||||||||||| || || | Sbjct 122654 CTCCCCAGGAAGTCTCCGCCATGGTTCTCACCAAGATGAAGGAGATCGCTGAGACCAAGC 122595 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | || || | || | | || || | || || || || ||||||| || || Sbjct 122594 TCGGCAAGAAGGTCGAGAAGGCCGTCATCACCGTCCCCGCCTACTTCAACGACAACCAGA 122535 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 | ||||| || |||||||||| ||| ||||| || || ||| ||| | || ||||| | Sbjct 122534 GGCAGGCCACTAAGGACGCTGGTGCCATTGCTGGCCTCAACGTTCTCCGTATCATCAACG 122475 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAG---GACGAAGATAAAA 195866 | || || || || || || || || ||||| | |||| ||| | || | Sbjct 122474 AGCCTACCGCCGCCGCTATCGCCTACGGTCTCGGTGCCGGCAAGTCCGACAAGGAGCGCA 122415 Query 195867 ATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAG 195926 | || | |||| ||||| ||||| || || || |||||||| || || | || | | Sbjct 122414 ACGTCCTCATCTACGATCTTGGTGGAGGAACTTTCGATGTCTCCCTCCTTCACATCCAGG 122355 Query 195927 GTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCG 195986 | ||| | ||| || |||||||| |||||||| ||||| || ||||| | || |||| Sbjct 122354 GCGGTGTCTTCACCGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGCCAGGACTTCG 122295 Query 195987 A 195987 | Sbjct 122294 A 122294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858831096480