Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq271 138 3e-27 seq357 107 6e-18 seq430 91.5 4e-13 seq157 91.5 4e-13 >seq271 Length=69178 Score = 138 bits (152), Expect = 3e-27 Identities = 218/307 (71%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| ||||| | ||||||||| || ||||| || | || || ||||| Sbjct 15525 TCTTCCAAGGCCTTGACAAGACGACGCTGGATGTAACCGGTCTCGGCGGTCTTGACAGCA 15584 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 ||||| || ||||| | |||||||||||||| |||||||| | ||| || ||| | Sbjct 15585 GTATCGATAAGACCTTCGCGACCACCCATAGCGTGGAAGAAGAACTCGGTAGG-CGTCAA 15643 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || ||||| | || |||||||| || | | ||||||| |||| ||||| Sbjct 15644 ACCACGAAGGTAGGAGTTTTCGACGAAACCGCGAGAAGCAGGCGAATAGTCGTCCTTGGG 15703 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT-CAACGTTCT 302809 || || ||||||||||||| || | ||||| | || | |||||| || | ||||| | | Sbjct 15704 GAAATGGGGCAGGGTCCTGTACTTAAAGCCGAAGGGAAGACGCTTGCCTTCCAACGAT-T 15762 Query 302810 GCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCAT 302869 |||| |||| | | |||||||||| || || | | | |||||||| |||| | Sbjct 15763 GCTGACCCACGGCGGCGGTCATCTGCGAGATGTTGACAGAAGATCCCTTGGAACCAGATT 15822 Query 302870 TTACCAT 302876 | ||||| Sbjct 15823 TGACCAT 15829 >seq357 Length=206932 Score = 107 bits (118), Expect = 6e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490 || |||| | |||| || || |||| || || ||||| |||| || |||||| Sbjct 60259 TGCACGCGGAAAGCGTCCGAGACGTCGAGGAGACGCTCCTTGAGGAAGGCTGAGGCACCG 60318 Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550 || || |||||||||||||| ||||| || ||||||||||||||||| || || || | | Sbjct 60319 TGAGAGATCATACAATCACGTTCCATCTCTCCGAAACGAAGACCACCGTCACGCGCACGA 60378 Query 251551 CCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTA 251610 ||||| | || ||||| || || | | |||||| | |||| || ||| Sbjct 60379 CCCTCAACTGGTTGACGGGTCAGGATTTGGAGAGGACCACGAGCGCGGGCGTGGATCTTG 60438 Query 251611 TCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || | ||||| || ||||||||||||| | | || |||| ||||| Sbjct 60439 TCGTCGACCATGTGGCGGAGACGCTGGTAGTAAGTTGGGCCGAGGAAGA 60487 Score = 87.8 bits (96), Expect = 5e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| |||||||| || || |||||||| |||||||| | | Sbjct 60667 TGAGCAATTGTCATACGGGAAGGAATAGCGTGAGGGTTGATGATAATGTCGGGGGTGATG 60726 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 ||||| | ||||||||||| | ||| | | || || | ||||| || |||||||| Sbjct 60727 CCATCGGAGGTGAAGGGCATGT-CTTCTTGACGGTAGGTGATACCAATGGTACCCTTTTG 60785 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||| |||||| ||||| || Sbjct 60786 ACCGTGACGAGAGGCGAACTTGTCACCGAT 60815 >seq430 Length=48834 Score = 91.5 bits (100), Expect = 4e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 354015 GGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAAC 354074 ||| ||| |||| || || |||||||| | |||||| ||||||||||| || | ||| | Sbjct 25243 GGCAAGACCACCGAGGGACTCACGGTCCAAGAAATTGGTAGGTTCGTCGAGCACAAGCAA 25184 Query 354075 GTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 ||| || | ||||||| || |||| || || ||||| ||||||||||| || || || Sbjct 25183 GTGGGGGTTGTTCCACATGGCACCAGCAAGGACGACCTTGACCTTCTGTCCACCAGAAAG 25124 >seq157 Length=447866 Score = 91.5 bits (100), Expect = 4e-13 Identities = 224/340 (66%), Gaps = 0/340 (0%) Strand=Plus/Plus Query 133318 CTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAAT 133377 ||| || || | ||||| |||||| || ||||| || || || || || || Sbjct 173895 CTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCAT 173954 Query 133378 TGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATTAGCGAATT 133437 || || ||||||| || | |||| || | || ||||||||||| | | | Sbjct 173955 CGACACCTACATCAGCGACGTCCGCCAGCGCCAGTACCTCTTCAACGCCATCGACAACAT 174014 Query 133438 TCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAG 133497 ||| || || ||||| ||||||||||| | ||||||| ||| || | | Sbjct 174015 TCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGATGGATCAGCGACGAGAAGTCCAC 174074 Query 133498 TTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTT 133557 || || ||||||||||| ||||||| || || ||||| || ||| ||| |||| Sbjct 174075 CTTCGCCTGCCGTCTCGTTGCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCTCGTT 174134 Query 133558 CTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617 | |||||| || ||| | || |||||||| | | |||| || || || ||||| Sbjct 174135 CGCCTCTATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGA 174194 Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 ||||| || | ||||||| | ||||| || || ||| Sbjct 174195 GCTTATCTCTCGTGACGAGGGCATGCACACTGACTTCGCC 174234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471809415774258