Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq104 100 2e-16 seq416 96.9 2e-15 seq98 84.2 1e-11 >seq104 Length=125481 Score = 100 bits (110), Expect = 2e-16 Identities = 135/186 (73%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| |||| | || || || ||||| |||||||||| Sbjct 107681 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 107622 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| || || ||||| | || | ||||||||||| | || || || || || Sbjct 107621 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCAC--AT- 107565 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| ||| || |||||| || | ||| |||||||| ||||| |||||||| Sbjct 107564 -TGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTA 107506 Query 34964 ACAAAG 34969 || ||| Sbjct 107505 ACGAAG 107500 >seq416 Length=196129 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| || ||||||||| ||||| |||||||| | | | | | || Sbjct 78004 AGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTCCTGCCGTCC 78063 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || || |||||| | || | ||||||||||| Sbjct 78064 TCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCT 78123 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||||| || | || || ||| Sbjct 78124 TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGACCTCGAGTGTGATAGTC 78183 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||| ||||| || ||||| |||||| Sbjct 78184 TTGCCTGTGAGAGTCTTGACGAAGATTTGCATG 78216 >seq98 Length=448780 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||| ||||||||| ||||| |||||||| || | || | || Sbjct 219556 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 219497 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||||| || || ||||| | || | ||||||||||| Sbjct 219496 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 219438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691077288646