Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq127 98.7 2e-15 >seq127 Length=55032 Score = 98.7 bits (108), Expect = 2e-15 Identities = 343/530 (65%), Gaps = 9/530 (2%) Strand=Plus/Plus Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTT 110528 ||||| | ||||| || || | |||||| || | | ||| | || || ||||| Sbjct 47127 CATGCCTCCCCTACGCTCTTCAGCGCAGGTACCCCTCAGGCACAGCTTGCGTCCTGCTTC 47186 Query 110529 CTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCT 110588 ||| | | || || ||||| ||||| ||||| || || |||| ||| | |||| Sbjct 47187 CTTATCGACATGAAGGATGACAGCATTGAGGGTATCTACGACACTCTCAAA--ATCTGCG 47244 Query 110589 C--TTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAG 110646 | | || || || ||| |||| || |||||| | || ||| ||||| | | | Sbjct 47245 CCATGATCTCCAAGAACGCTGGTGGTATTGGTCTCAACACTCACCGCATTCGTGCCACTG 47304 Query 110647 GAGCAAATATCG-CAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTC 110705 | || | || | | || | | || || |||| || || ||||| ||| | | || Sbjct 47305 GTGCTTACATTGGCGGCACCAACGGTACCTCCAAC-GGTCTCGTTCCCATGCTTCGTGTT 47363 Query 110706 TTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCT 110762 | |||| |||| || || || | || ||||| || | | || | |||||| Sbjct 47364 TACAACAACACCGCTCGTTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCT 47423 Query 110763 ATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAA 110822 ||||| ||||| || ||||| | || || || ||| | || ||||| || || || Sbjct 47424 ATCTACCTCGAGCCATGGCACGCCGACATCATTCCCTTCCTGGACCTTCGCAAGAACCAC 47483 Query 110823 GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTC 110882 || |||||| | || ||||| | || || || ||||||| | || || ||| Sbjct 47484 GGCAAGGAAGAAGTCCGTGCTCGTGACCTCTTCTACGCCCTGTGGATCCCCGACTTGTTC 47543 Query 110883 ATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGT 110942 ||||| ||||| || | || |||| ||| |||| ||||| ||||| | || ||| Sbjct 47544 ATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTGATGTGCCCTCACGAGTGCCCCGGT 47603 Query 110943 CTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGA 110992 || | ||||| || || | ||||| || | || ||||| || || || Sbjct 47604 CTTGCCGATGTCTACGGCGAGGAGTTCGAGGCGCTGTACGAGAAGTACGA 47653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186806200579074