Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq127 134 1e-26 seq157 100 3e-16 seq416 89.7 5e-13 >seq127 Length=55032 Score = 134 bits (148), Expect = 1e-26 Identities = 613/961 (64%), Gaps = 21/961 (2%) Strand=Plus/Minus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCG 147519 |||| ||| || || ||||| ||||| ||| || | | |||||| | ||| || Sbjct 47878 GCGAGAGAAGCAAGGTTGCACACGGCGACCTCATCAGGTGCAGTGTACTCGATGATCTCT 47819 Query 147520 GCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCAC 147579 | ||||| |||| || ||| |||| || | ||| ||||| || || ||| Sbjct 47818 GTGCACAAGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCA 47759 Query 147580 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA 147639 || |||||| | |||||| | || |||||||||||| || | || | ||| | || Sbjct 47758 GCATCTTTGTAAAGCATGAAGGGGTTGCCGGTCTCGACCTGAGCCTCGAGGATGG-CGTA 47700 Query 147640 TGCAGGTC--CTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGT 147697 ||| | ||| || || | || ||| |||||||| |||||| ||||| Sbjct 47699 C-CAGACCTTCTGTGCGCGGATAGTCTCGCGACCACGGCCCTCACGCTCGTACTTCTCGT 47641 Query 147698 ACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACA 147757 ||| | ||| ||||| ||||||||| ||||||||| ||||| |||| || || |||| Sbjct 47640 ACAGCGCCTCGAACTCCTCGCCGTAGACATCGGCAAGACCGGGGCACTCGTGAGGGCACA 47581 Query 147758 TCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCG 147817 |||| | ||| || ||| | | || || ||| |||| || || | |||||| | Sbjct 47580 TCAGAGTCCAGTTGCCGTTCTGTTCCACACGCTTCATGAACAAGTCGGGGATCCACAGGG 47521 Query 147818 CGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAA--TTAAG 147875 |||| | || || || || | || || ||| ||| || | || | || Sbjct 47520 CGTAGAAGAGGTCACGAGCACGGACTTCTTCCTTGCCGTGGTTC--TTGCGAAGGTCCAG 47463 Query 147876 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTT 147935 | | | ||||||||||||||| || || | ||||| || | ||||| ||||| Sbjct 47462 GAAGGGAATGATGTCGGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCGGGGCGCTT 47403 Query 147936 T---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAG 147992 || ||||||||||| | || | ||||||| | || || | |||||| | || Sbjct 47402 GTTGCCACCCTGGTCGACGTAACGAGCGGTGTTGTTGTAAACACGAAGCATGGGAACGAG 47343 Query 147993 GCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCAC 148052 ||| | | || ||||||||| || | || ||| || | ||| Sbjct 47342 ACCGTTGGAGGTACCGTTGGTGCCGCCAATGTAAGCACCAGTGGCACGAATGCGGTGAGT 47283 Query 148053 GTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAA--TCGCCCAATGTCGTG 148110 ||| | ||||| || || ||| ||| || || ||||| | | |||||| Sbjct 47282 GTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGCGCAGATTTTGAGAGTGTCGT- 47224 Query 148111 TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACA---TTTGC 148167 |||| || || |||||||| | || | | | | | || || || | || | ||| Sbjct 47223 -AGATACCCTCAATGCTGTCATCCTTCATGTCGATAAGGAAGCAGGA-CGCAAGCTGTGC 47166 Query 148168 GGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTC 148227 | | || || || ||| || || || || || ||||| | || | | Sbjct 47165 CTGAG--GGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGTAAAGTACTTGTTGGAC 47108 Query 148228 ATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACG 148287 || | || ||||| || ||| | ||||||||||||||||| || || | || || Sbjct 47107 ATGTAGTTGTAGGTCTCGATCGCGGCCTCGATGTCGTCGCCGTGGATACCGACAGCAACT 47048 Query 148288 CGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCA 148347 ||||||| |||||||||||||| |||||||||| || ||| ||| |||||| Sbjct 47047 CGCATGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCGTCGATGCGGAGGAGATATGAG 46988 Query 148348 TTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCC 148407 || || || ||| | || ||||| | ||| | || || | ||||| | |||||| Sbjct 46987 CGCTCAAGCGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCC 46928 Query 148408 G 148408 | Sbjct 46927 G 46927 >seq157 Length=447866 Score = 100 bits (110), Expect = 3e-16 Identities = 171/240 (71%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 47033 GAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGT 47092 |||||| | | ||||| |||| |||||| ||||||| | | | || ||||| Sbjct 174285 GAGCATCATCACCGAGGCTGTGACCATCGAGCAGGAGTTCCTCTCCGACGCTCTGCCTTG 174344 Query 47093 CGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGTTTGTGGCGGATC 47151 ||| |||| ||||||||||| || || |||||| |||| |||||||| || || || | Sbjct 174345 TGCCCTGCTCGGCATGAACGC-CAACCTCATGTGCCAATACATTGAGTTCGTCGCCGACC 174403 Query 47152 GTCTGTTGGT-GCAGCTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTGAGTT 47209 ||||| | | ||| ||||| |||| ||| | | || || || || || || || Sbjct 174404 GTCTGCTCCTCGCA-CTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTT 174461 Query 47210 TATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 ||| | ||||| || || | ||||| ||||| || |||||||| || ||||| ||||| Sbjct 174462 CATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTA 174521 >seq416 Length=196129 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| ||||||||||| || | || || || ||||| || || |||| | Sbjct 78250 GACTCCTTTTGGATGTTGTAGTCACTGAGAGTGCGACCGTCCTCGAGTTGCTTGCCGGCA 78309 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || ||||| ||||| || || || || || |||| Sbjct 78310 AAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACA 78369 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| |||| | |||||| |||| || | || || ||||| || || || Sbjct 78370 TTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTC 78429 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 78430 ACGAAGATCTGCAT 78443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608614384240