Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq416 134 1e-26 seq104 93.3 4e-14 >seq416 Length=196129 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| |||||||| |||||||| ||||||||||| | | ||| || ||| ||| Sbjct 78235 ACGAGGTGGAGCGTGGACTCCTTTTGGATGTTGTAGTCACTGAGAGTGCGACCGTCCTCG 78294 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| ||||| |||| ||||||||| || || || ||||| || || || || Sbjct 78295 AGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 78354 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||||| || ||||| ||||| || || || || Sbjct 78355 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTG 78414 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 78415 CCAGTGAGGGTCTTCACGAAGATCTGCAT 78443 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||| ||||| |||||||||||||||| | ||| || || || Sbjct 78463 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCCTCA 78522 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | ||||||||||| || || ||||| || || || || Sbjct 78523 AGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGG 78582 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| || || || || ||||| || ||||| || Sbjct 78583 ATCTTGCTCTTCACGTTGTCGATAGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTT 78642 Query 134685 CCGGT 134689 || || Sbjct 78643 CCCGT 78647 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTG 134554 || || | ||| ||||| || || || ||||| || |||||||||| || ||| ||| Sbjct 77998 AGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAA-GGTCCT 78056 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 ||| |||||||| || || || || || | ||||| || || || || || || || Sbjct 78057 GCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTC 78116 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || |||||||| || ||||| ||| | ||||| || ||||| || ||||| || Sbjct 78117 CTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGACCTCGAGTGT 78176 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||| || ||||| |||||||| Sbjct 78177 GATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 78215 >seq104 Length=125481 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| | ||| |||||||| ||||| || || | Sbjct 107681 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 107622 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| ||||| || || || || ||||| || || || || || || || || || Sbjct 107621 TCAAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 107562 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || ||||| || ||||| || || || | || ||||||| Sbjct 107561 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 107502 Query 134704 A 134704 | Sbjct 107501 A 107501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395658213680