Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq127 105 6e-18 seq416 91.5 1e-13 seq104 87.8 2e-12 >seq127 Length=55032 Score = 105 bits (116), Expect = 6e-18 Identities = 384/598 (64%), Gaps = 5/598 (1%) Strand=Plus/Minus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 ||| || ||| || ||||| || | ||| |||||||||||| || |||||||| || Sbjct 47600 GGGGCACTCGTGAGGGCACATCAGAGTCCAGTTGCCGTTCTGTTCCACACGCTTCATGAA 47541 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 ||| || || | ||| | ||||| || || || | ||| ||||| | || | Sbjct 47540 CAAGTCGGGGATCCACAGGGCGTAGAAGAGGTCACGAGCACGGACTTCTTCCTTGCCG-T 47482 Query 131722 AAtttttttCAAATTTAAA-AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTG 131780 || || || | | ||| | ||||| || ||||| || || | || | | Sbjct 47481 GGTTCTTGCGAAGGTCCAGGAAGGGAATGATGTCGGCGTGCCATGGCTCGAGGTAGATAG 47422 Query 131781 CCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837 | | || || |||||| || || || | || | |||| | |||||||||| | Sbjct 47421 CAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCGGTGTTGTTGTAAA 47362 Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897 | || | |||||| | | |||||||| | | || ||||||| |||||| ||| Sbjct 47361 CACGAAGCATGGGAACGAGACCGTTGGAGGTACCGTTGGTGCCGCCAATGTAAGCACCAG 47302 Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGC 131957 |||| | || |||| |||||| |||||||| || ||| || ||||| | |||| Sbjct 47301 TGGCACGAATGCGGTGAGTGTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGCGC 47242 Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGC 132017 | | | ||||||| |||||||| || | |||||| | ||||||| | |||| Sbjct 47241 AGATTTTGAGAGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATAAGGAAGC 47182 Query 132018 AAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAA 132077 | || | | |||| ||| || || || || | || ||| ||| ||||||| Sbjct 47181 AGGACGCAAGCTGTGCCTGAGGGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGTAA 47122 Query 132078 AAAGTTTTTTGGCCATGCACCGATACGATTGTATAGCGGACTCGATATCGCCCAGATGTA 132137 | || |||| |||| | || | | || |||| |||||| ||| | || | Sbjct 47121 AGTACTTGTTGGACATGTAGTTGTAGGTCTCGATCGCGGCCTCGATGTCGTCGCCGTGGA 47062 Query 132138 TGGTCAATGCGACCCGCATGTACATGTGTTGAATGCGCTCGGCCGTTTTGCCGTCGAT 132195 | | || || |||||| |||||| || | |||||| |||||||||||| Sbjct 47061 TACCGACAGCAACTCGCATGATCATGTGCTGTGGTCTCTCGGCAACTTTGCCGTCGAT 47004 >seq416 Length=196129 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | |||| || | || || || || || || |||||||| Sbjct 77988 GCCACCGCGAAGACGGAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 78047 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | | | |||| |||||||| ||||| ||| | || || |||||||| || || || Sbjct 78048 CAAGGTCCTGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGGCGCTGTTGGTCTGGTGG 78107 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || |||||| || | | | || | ||||| | | ||| || Sbjct 78108 GATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCGAC 78167 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| ||||| || ||||| || || ||||||||||| Sbjct 78168 CTCGAGTGTGATAGTCTTGCCTGTGAGAGTCTTGACGAAGATTTGCAT 78215 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||||||||| |||| | || || ||||| || || Sbjct 78475 GTGGACTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCCTCAAGCTGCTTGCCC 78534 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| ||||| |||||||| || | ||||| || || ||||||| | ||| Sbjct 78535 GCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC 78594 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 | | | || | |||||| | | ||||| || || || || | || ||||| Sbjct 78595 ACGTTGTCGATAGTGTCCGAAGACTCAACCTCGAGGGTGATGGTCTTTCCCGT 78647 >seq104 Length=125481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || ||||||||| | | |||| |||| |||||||| || |||||| | || Sbjct 107679 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 107620 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 | |||||||| ||||| || | ||||| || || ||||||| | |||| | || Sbjct 107619 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 107560 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239 | ||||| | || || || || || || || | ||||||||||| || || || ||| Sbjct 107559 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAG 107500 Query 27240 AT-TTGCA 27246 | ||||| Sbjct 107499 CTGTTGCA 107492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932152362608