Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq157 109 2e-18 seq127 93.3 1e-13 >seq157 Length=447866 Score = 109 bits (120), Expect = 2e-18 Identities = 370/559 (66%), Gaps = 32/559 (6%) Strand=Plus/Plus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACT-ATCTAGCCATGA 443407 ||||||||||||||||||||||| | ||| |||||| | || || | | | | |||| Sbjct 173725 GAGGAGATTGATCTCTCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGA-CGATGA 173783 Query 443408 ACGCGATTTCTTCAAATGCATCTTG---GCCTTCTTTGCACCGAGCGACGGTATCGTCGG 443464 || |||||||| | | || |||||||| || | ||||| || ||| Sbjct 173784 GCG---TTTCTTCATTTCACACGTGCTCGCCTTCTTCGCCGCCTCTGACGGCATTGTCAA 173840 Query 443465 TGAGAATCTGGTGACGCGTTTC---TACGAAATGGTAGTGTACACCGAGGCCCGCTACTT 443521 ||||| || || ||| ||| | ||| ||| | | | ||||| |||| ||| Sbjct 173841 CGAGAACCTTGTCGAGCGCTTCAGCTCCGA---GGTGCAGATCCCTGAGGCTCGCTGCTT 173897 Query 443522 CTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAA 443581 ||||| ||||| | ||||||||||| ||| ||||| |||| | | ||| | Sbjct 173898 CTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGA 173957 Query 443582 GACACTAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCTCATCGTTCAT-GACCA 443637 || ||| || | ||| | | ||||| || | ||||| | || ||| ||| | Sbjct 173958 CAC-CTACATCAG--CGACGTCCGCCAGCGCCAGTACCTCTTC--AACGC-CATCGACAA 174011 Query 443638 CG--CCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGA-GAAAATC 443694 | || ||||| | | ||| || |||||| | ||| || | ||| || || Sbjct 174012 CATTCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGATGGATC-AGCGACGAGAAGT 174070 Query 443695 TCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCA 443754 || ||||| | || || || || ||||||| |||||||| | || || ||| Sbjct 174071 CCACCTTCGCCTGCCGTCTCGTTGCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCT 174130 Query 443755 GCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGT 443814 | || ||||| |||||||||||||| |||||||| || ||| ||||| ||||| Sbjct 174131 -CGTTCGCCTCTATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCC 174189 Query 443815 AACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 ||||| || ||| ||| |||||||| |||| ||||||||||| || |||| | | Sbjct 174190 AACGAGCTTATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTGCTCTTCTC- 174248 Query 443875 AAACACATCGTGCACAAGC 443893 ||| || |||||||| Sbjct 174249 --ACAGCTCAAGCACAAGC 174265 >seq127 Length=55032 Score = 93.3 bits (102), Expect = 1e-13 Identities = 348/537 (65%), Gaps = 8/537 (1%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||| | ||||||| ||||| |||||||| || || ||| ||| ||| Sbjct 47349 CCCATGCTTCGTGTTTACAACAACACCGCTCGTTACGTCGACCAGGGTGGCAACAAGCGC 47408 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || || || | |||||||| ||||| |||||||||||||| | || | Sbjct 47409 CCCGGTGCCTTTGCTATCTACCTCGAGCCATGGCACGCCGACATCATTCCCTTCCTGGAC 47468 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 || | | || ||||| || || | || || ||| ||| | ||| | ||| Sbjct 47469 CTTCGCAAGAACCACGGCAAGGAAGAAGTCCGTGCTCGTGACCTCTTCTACGCCCTGTGG 47528 Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220 | ||| |||| ||| || ||||||| ||| | ||||| || ||||| || Sbjct 47529 ATCCCCGACTTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTGATGTGCCCT 47588 Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280 || | |||||||| | ||| | || || ||||| || ||||| | || Sbjct 47589 CACGAGTGCCCCGGTCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCGCTGTACGAGAAG 47648 Query 255281 TACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACACGAT 255339 |||||||||| ||||| | ||| | | | | | ||| ||||| ||||| || | || Sbjct 47649 TACGAGCGTGAGGGCCGTGGTCGCGAGACTA-TCCGCGCACAGAAGGTCTGGTACGCCAT 47707 Query 255340 GGT-GCGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGA-CCACATAAAC 255397 | | | | ||| | || ||||| | || ||| | | ||||||| | || | Sbjct 47708 CCTCGAGGCT-CAGGTCGAGACCGGCAACCCCTTCATGCTTTACAAAGATGCTGCCAACC 47766 Query 255398 GCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTGTGCACCGAGATT 255457 ||| | | ||||| ||| || || || ||| |||| ||| ||||||| ||||| Sbjct 47767 GCAAGAGC-AACCAGAAGAACCTGGGCACCATTCGCAGCTCCAACTTGTGCACAGAGATC 47825 Query 255458 ACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCATCTCGCTC 255514 | | |||| || | | ||||| ||||| |||||| | || || |||||||| Sbjct 47826 ATCGAGTACACTGCACCTGATGAGGTCGCCGTGTGCAACCTTGCTTC--TCTCGCTC 47880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588327167859130