Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq127 172 7e-38 seq214 127 3e-24 seq157 105 8e-18 >seq127 Length=55032 Score = 172 bits (190), Expect = 7e-38 Identities = 572/876 (65%), Gaps = 23/876 (3%) Strand=Plus/Minus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||||| | ||||| |||| || || | ||||| || || |||||| | ||| Sbjct 47893 ACATAGGTGGGAAGAGCGAGAGAAGCAAGGTTGCACACGGCGACCTCATCAGGTGCAGTG 47834 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 ||||| | || ||||| || |||||||| || ||| || |||| ||||| ||||| Sbjct 47833 TACTCGATGATCTCTGTGCACAAGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTG 47774 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400 ||||| |||| ||||| ||||| |||||| |||| | || ||||| ||| | Sbjct 47773 CTCTTGCGGTTGGCAGCATCTTTGTAAAGCATGAAGGGGTTGCCGGTCTCGACCTGAGCC 47714 Query 111401 TTGAGAATAGCCTTCCAAACAT-CGGCG-GCTGGTACAATGGCGTTGGCCCGTCCCTCCG 111458 | ||| || || | ||| || | | | | || | || | ||| | || ||||| Sbjct 47713 TCGAGGATGGCGTACCAGACCTTCTGTGCGCGGATAGTCTCGCGAC--CACGGCCCTCAC 47656 Query 111459 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 111518 ||||||||| ||| || || || |||||||| || | |||| ||||| || Sbjct 47655 GCTCGTACTTCTCGTACAGCGCCTCGAACTCCTCGCCGTAGACATCGGCAAGACCGGGGC 47596 Query 111519 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGT 111578 || || || || | |||| ||| | || | || || ||||||||||| | || Sbjct 47595 ACTCGTGAGGGCACATCAGAGTCCAGTTGCCGTTCTGTTCCACACGCTTCATGAACAAGT 47536 Query 111579 CTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTG 111637 | || |||||||||| | ||||| || | | ||| || | ||||| | || ||||| Sbjct 47535 CGGGGATCCACAGGGCGTAGAAGAGGTCACGAGCACGGA-CTTCTTCCTTGCCGTGGTTC 47477 Query 111638 AGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATA 111697 || | || ||||| ||||| || |||||||||||||| || |||| || | Sbjct 47476 TTGCGAAGGTCCAGGAAGGGAATGATGTCGGCGTGCCATGGCTCGAGGTAGATAGCAAAG 47417 Query 111698 GATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCG 111753 | || | | | | ||| | || | || || || || ||| ||| | || || Sbjct 47416 GCACCGGGGCGCTTGTTG-CCACCCTGGTCGACGTAACGAGCGGTGTTGTTGTAAACACG 47358 Query 111754 AAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGC 111813 |||||| |||| | ||| | || ||| || || || | ||| || | |||| Sbjct 47357 AAGCATGGGAACGAGACCGTTGGAGGTACCGTTGGTGCCGCCAATGTAAGCACCAGTGGC 47298 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACAC 111871 | | || ||| | |||||||| ||||| ||| ||||| | ||||| | Sbjct 47297 ACGAATGCGGTGAGTGTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGCGCAGAT 47238 Query 111872 TCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAA 111931 | | ||||| | |||||||| | || ||| ||||| || ||||||||||||| Sbjct 47237 T--TTGAGAGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATAAGGAAGCA- 47181 Query 111932 CTGGAC---ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATG 111988 |||| | ||| | || ||||| || ||||||| || || | || || | Sbjct 47180 --GGACGCAAGCTGTGCCTGAGGGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGT- 47124 Query 111989 AACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTG 112047 || ||| | | |||||| | || ||| ||||| | | | || ||||| || ||||| Sbjct 47123 AAAGTACTTGTTGGACATGTAGTTGTAGGTCTCGATCGCGGCCTCGATGTCGTCGCCGTG 47064 Query 112048 GATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||| |||| || || ||||||| ||||| |||||| Sbjct 47063 GATACCGACAGCAACTCGCATGATCATGTGCTGTGG 47028 >seq214 Length=46841 Score = 127 bits (140), Expect = 3e-24 Identities = 221/317 (70%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 ||||||||||| |||||||||| ||||| || |||| | ||| || | |||||| Sbjct 5825 GCATCAATCTCGTCAATGAAGATGATACAAGGCGTGTTTTTTCTTGCGTTTGCGAAGAGA 5766 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CA 11748 ||||| || ||| | ||| ||||| || ||||||||||| || | | ||||| || Sbjct 5765 TCGCGTACTCTTGAAGGACCAACACCGACGAACATCTCCACGAACTCAGATCCAGAGACA 5706 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 ||| | ||| || || |||||||| || | ||| |||||| |||||||| || || Sbjct 5705 CTGAA-GAAAGGCACGCCGGATTCACCAGCAGTAGCTTTGGCGAGAAGGGTCTTACCAGT 5647 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATAT 11866 ||| || ||| || | ||||| || ||||||||||| || |||| | || Sbjct 5646 ACCAGGAGGACCACTCAGGACAGCGCCACGAGGGATCTTGGCTCCGAGCTTCTGGA--AT 5589 Query 11867 CTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATC 11926 ||| | || | |||||| ||| |||| ||| || || | || ||| |||| || Sbjct 5588 CTCGCAGGCTCCTTGAGGAAAGAAACAAACTCCATAATCTCCACCTTCGCCTCGTCCATG 5529 Query 11927 CCCTCAACATCACTGAA 11943 || |||| || ||||| Sbjct 5528 CCAGCAACGTCGCTGAA 5512 >seq157 Length=447866 Score = 105 bits (116), Expect = 8e-18 Identities = 298/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || ||||| |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 174521 TACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 174462 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA-AATGGGTGGCACCCCAACTTGTTTGAGGAG--- 122486 ||||| || || || | ||||| | || | | || | || |||||| Sbjct 174461 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA----GTGCGAGGAGCAG 174406 Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546 ||| || | || |||||||||| | | |||| | | |||||| |||| ||| Sbjct 174405 ACGGTCGGCGACGAACTCAATGTATTGGCACATGAGGTTGGCGTTCATGCCGAGCAGGGC 174346 Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 122606 ||| || || ||||| ||| |||| | | ||| || || ||||| | | |||| Sbjct 174345 ACAAGGCAGAGCGTCGGAGAGGAACTCCTGCTCGATGGTCACAGCCTCGGTGATGATGCT 174286 Query 122607 GTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACT 122665 || | || | | || || | | | | | ||||||| ||| || | Sbjct 174285 CTGTACGAGGTCAGGCGAAGG-CTTGTGCTTGAGCTGTGAGAAGAGCAGGCAGGCGAAGT 174227 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||| | ||||| || || || ||||| || || |||||| ||||| | ||||| Sbjct 174226 CAGTGTGCATGCCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTAAGACCAGCCATGA 174167 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 | || |||||||||||||| | |||| | ||| || || ||||||||||| || || | Sbjct 174166 GGCCACGCTTCTTCAACCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGATGCCTTCGA 174107 Query 122786 CACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 | ||||| |||| || || |||||||| Sbjct 174106 CGGCAGCAAAGGCAACGAGACGGCAGGCGAAGG 174074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028592926400